Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
H3F3CQ6NXT2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 RNU6-1090P-201ENST00000364065 94 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 RNU4-75P-201ENST00000364621 146 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 SNORA25-201ENST00000384384 134 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 RNU6-306P-201ENST00000384617 107 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.559-201ENST00000384686 107 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 MIR515-2-201ENST00000384883 83 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 MIR515-1-201ENST00000384884 83 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 MIR517A-201ENST00000385001 87 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 MIR586-201ENST00000385035 97 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 MIR518E-201ENST00000385252 88 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 NDUFA5P4-201ENST00000436704 385 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 MTND2P22-201ENST00000444325 1033 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AC019235.1-201ENST00000503847 207 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 UBL5P4-201ENST00000562584 236 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AL162413.1-201ENST00000603198 110 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 DISC2.1-201ENST00000612827 205 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 snoZ196.1-201ENST00000625269 89 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AC068137.3-201ENST00000639191 341 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 AC018630.2-201ENST00000534866 2403 ntBASIC0.96□□□□□ -2.26
H3F3CQ6NXT2 RNU6-1123P-201ENST00000362347 106 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 SNORA67.2-201ENST00000384300 149 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 RNU6-541P-201ENST00000384709 110 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 RNA5SP504-201ENST00000410676 117 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 DLGAP5P1-201ENST00000430307 464 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AC079354.2-201ENST00000453523 154 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 MTCO2P30-201ENST00000503662 364 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AC025647.1-201ENST00000517879 253 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 MTND1P5-201ENST00000517906 940 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AC245505.1-201ENST00000556398 224 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 TPRKBP2-201ENST00000565969 475 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AL022345.2-201ENST00000606307 135 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AC019193.3-201ENST00000609144 554 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 AC121333.1-201ENST00000567488 2709 ntBASIC0.95□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.41-201ENST00000362646 102 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 RNU6-873P-201ENST00000363833 107 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.224-201ENST00000364308 111 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 RNU6-534P-201ENST00000364877 106 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 RNU6-1240P-201ENST00000365155 104 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.415-201ENST00000384012 112 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.517-201ENST00000384551 106 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 RNU6-908P-201ENST00000410160 94 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 MTCO3P18-201ENST00000440206 761 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 DYNLT3P2-201ENST00000442517 295 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 RNU6-113P-201ENST00000516653 101 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 RNU1-142P-201ENST00000516682 145 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 RNU6-58P-201ENST00000517143 103 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 CYCSP23-201ENST00000519781 313 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 MIR4742-201ENST00000581069 85 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 MIR3672-201ENST00000584290 82 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 SNORD11B-201ENST00000607707 90 ntBASIC0.94□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.796-201ENST00000364268 102 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.799-201ENST00000364992 102 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.319-201ENST00000365138 92 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 RNU6-128P-201ENST00000383976 107 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 RNU6-950P-201ENST00000384651 107 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 RNU2-16P-201ENST00000410712 136 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 MTCO1P20-201ENST00000425366 358 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 MTND1P29-201ENST00000448112 647 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 RPL30P10-201ENST00000488148 337 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 ACA59.1-201ENST00000515966 143 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 SNORA31.10-201ENST00000516482 106 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 RNU6-256P-201ENST00000516747 97 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 AC136932.1-201ENST00000574771 208 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 NBR2-204ENST00000587322 63 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 AC021506.2-201ENST00000612354 169 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 AL138726.1-201ENST00000614873 333 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 AC106754.2-201ENST00000623006 233 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 AC027335.2-201ENST00000624030 375 ntBASIC0.93□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.100-201ENST00000363141 102 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.256-201ENST00000364594 104 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 RNU4-9P-201ENST00000364951 139 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 MTND1P1-201ENST00000445453 368 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 RPS27P1-201ENST00000450552 247 ntBASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.92□□□□□ -2.26
H3F3CQ6NXT2 HMGN2P26-201ENST00000463169 339 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms