Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RPS26P45-201ENST00000471748 340 ntBASIC1.23□□□□□ -2.21
RAB40BQ12829 AC093303.1-201ENST00000514549 295 ntBASIC1.23□□□□□ -2.21
RAB40BQ12829 Y_RNA.682-201ENST00000516457 100 ntBASIC1.23□□□□□ -2.21
RAB40BQ12829 MIR3124-201ENST00000582636 67 ntBASIC1.23□□□□□ -2.21
RAB40BQ12829 AC018638.8-201ENST00000588755 281 ntBASIC1.23□□□□□ -2.21
RAB40BQ12829 AL355802.3-201ENST00000607571 545 ntBASIC1.23□□□□□ -2.21
RAB40BQ12829 AL121890.5-201ENST00000620848 304 ntBASIC1.23□□□□□ -2.21
RAB40BQ12829 MTND5P35-201ENST00000557537 1720 ntBASIC1.23□□□□□ -2.21
RAB40BQ12829 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RAB40BQ12829 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RAB40BQ12829 Y_RNA.86-201ENST00000363020 111 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 RNU6-950P-201ENST00000384651 107 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 MIR194-1-201ENST00000384892 85 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 RNU6-1186P-201ENST00000410429 97 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 RPS27P16-201ENST00000425758 201 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 USP9YP16-201ENST00000430287 407 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 AC027119.1-201ENST00000440877 241 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.22□□□□□ -2.21
RAB40BQ12829 USP9YP23-201ENST00000455085 407 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.22□□□□□ -2.21
RAB40BQ12829 SNORD5.1-201ENST00000458800 75 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 MTND5P5-201ENST00000503764 376 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 MIR4742-201ENST00000581069 85 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 AC022432.1-201ENST00000595739 310 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 MZT1P2-201ENST00000604387 248 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 AC100812.1-201ENST00000607622 580 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 AC010999.1-201ENST00000611856 324 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 U6.108-201ENST00000637764 58 ntBASIC1.22□□□□□ -2.21
RAB40BQ12829 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.22□□□□□ -2.21
RAB40BQ12829 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.21□□□□□ -2.22
RAB40BQ12829 RNA5SP99-201ENST00000364020 114 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 RNU6-510P-201ENST00000391239 108 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 AC004965.1-201ENST00000413033 213 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.21□□□□□ -2.22
RAB40BQ12829 AL135790.2-201ENST00000437701 267 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 AC005002.2-201ENST00000438228 269 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.21□□□□□ -2.22
RAB40BQ12829 RNU6-329P-201ENST00000459618 107 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 AC011352.1-201ENST00000512300 793 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 RNU6-1114P-201ENST00000516022 107 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 CBX3P8-201ENST00000532412 525 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 AL137100.2-201ENST00000555786 315 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 AL929325.1-201ENST00000603096 117 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 AC073869.6-201ENST00000640656 341 ntBASIC1.21□□□□□ -2.22
RAB40BQ12829 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
RAB40BQ12829 RNU6-222P-201ENST00000362438 107 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 Y_RNA.184-201ENST00000363884 108 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 RNU4-13P-201ENST00000364019 141 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 RNU6-60P-201ENST00000364792 103 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 RNU6-1065P-201ENST00000384513 106 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 MIR513A1-201ENST00000385138 129 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 RNA5SP213-201ENST00000391031 106 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 AL606517.2-201ENST00000442855 241 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 MTND4P18-201ENST00000447010 465 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 RPS27P1-201ENST00000450552 247 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 Y_RNA.683-201ENST00000516508 93 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 RNU6-107P-201ENST00000516643 102 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 APOOP3-201ENST00000536787 586 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 AL442163.3-201ENST00000554110 156 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.2□□□□□ -2.22
RAB40BQ12829 AC040896.1-201ENST00000613819 479 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 AL078604.3-201ENST00000615580 211 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 AC002553.4-201ENST00000616896 331 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
RAB40BQ12829 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
RAB40BQ12829 Y_RNA.106-201ENST00000363189 100 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 Y_RNA.473-201ENST00000384333 102 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 RNU1-139P-201ENST00000391307 165 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC010154.1-201ENST00000425857 269 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC099513.1-201ENST00000490423 301 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.19□□□□□ -2.22
RAB40BQ12829 RNU6-1016P-201ENST00000516689 94 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC091144.1-201ENST00000519573 138 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC093023.1-201ENST00000547375 507 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AL160236.1-201ENST00000556317 195 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.19□□□□□ -2.22
RAB40BQ12829 AC015720.1-201ENST00000565251 277 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 FRG2DP-202ENST00000566967 323 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.19□□□□□ -2.22
RAB40BQ12829 AC022217.4-201ENST00000604389 163 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 BNIP3P10-201ENST00000605360 577 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC018462.2-201ENST00000605375 395 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC007014.2-201ENST00000615581 479 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 U6.73-201ENST00000619194 103 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 AC091812.1-201ENST00000432235 1948 ntBASIC1.19□□□□□ -2.22
RAB40BQ12829 MTND5P16-201ENST00000460269 1703 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 RNA5SP259-201ENST00000365541 109 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.18□□□□□ -2.22
RAB40BQ12829 MIR548F5-201ENST00000408421 86 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 EIF1P1-201ENST00000421436 341 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.18□□□□□ -2.22
RAB40BQ12829 AC245047.3-201ENST00000429428 127 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.18□□□□□ -2.22
RAB40BQ12829 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.18□□□□□ -2.22
RAB40BQ12829 RPS3AP52-201ENST00000435639 297 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AC026782.1-201ENST00000512952 449 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms