Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MIR302D-201ENST00000362275 68 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 Y_RNA.48-201ENST00000362710 103 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 snoU2-30.2-201ENST00000362805 70 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 RNU6-1019P-201ENST00000364424 107 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 RNU6-17P-201ENST00000384245 107 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 RNU6-18P-201ENST00000384527 107 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 RNU6-417P-201ENST00000384712 107 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 MIR520A-201ENST00000384862 85 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 RNA5SP118-201ENST00000410385 109 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.19□□□□□ -2.22
SMARCB1Q12824 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.19□□□□□ -2.22
SMARCB1Q12824 COX6CP14-201ENST00000469580 174 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 RNU6-948P-201ENST00000516374 107 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.19□□□□□ -2.22
SMARCB1Q12824 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.19□□□□□ -2.22
SMARCB1Q12824 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.19□□□□□ -2.22
SMARCB1Q12824 AL050343.2-201ENST00000607338 280 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 AC084782.3-201ENST00000612282 578 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 AC007014.2-201ENST00000615581 479 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.19□□□□□ -2.22
SMARCB1Q12824 U6.108-201ENST00000637764 58 ntBASIC1.19□□□□□ -2.22
SMARCB1Q12824 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.19□□□□□ -2.22
SMARCB1Q12824 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SMARCB1Q12824 RNU6-727P-201ENST00000363592 107 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 Y_RNA.415-201ENST00000384012 112 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 RNA5SP467-201ENST00000391274 118 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SMARCB1Q12824 AL161935.2-201ENST00000414627 60 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 CST2P1-201ENST00000425770 87 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 MTND1P4-201ENST00000435196 415 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 AC073910.1-201ENST00000445047 438 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.18□□□□□ -2.22
SMARCB1Q12824 RNU6-329P-201ENST00000459618 107 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 AP000870.1-201ENST00000472927 406 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 AC091179.3-201ENST00000474761 144 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.18□□□□□ -2.22
SMARCB1Q12824 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 RNA5SP445-201ENST00000515889 115 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 SNORA25.14-201ENST00000516481 132 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 RNU6-902P-201ENST00000517212 91 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 AC025647.1-201ENST00000517879 253 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.18□□□□□ -2.22
SMARCB1Q12824 AL078596.1-201ENST00000624856 447 ntBASIC1.18□□□□□ -2.22
SMARCB1Q12824 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
SMARCB1Q12824 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
SMARCB1Q12824 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SMARCB1Q12824 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SMARCB1Q12824 Y_RNA.6-201ENST00000362350 114 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 RNU6-222P-201ENST00000362438 107 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 Y_RNA.86-201ENST00000363020 111 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 RNU6-271P-201ENST00000363858 105 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 RNU6-245P-201ENST00000384020 107 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 MIR10B-201ENST00000385011 110 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 MIR153-2-201ENST00000385225 87 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 RNU6-159P-201ENST00000391080 106 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 AL356776.1-201ENST00000406574 447 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 MIR1277-201ENST00000408536 78 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.17□□□□□ -2.22
SMARCB1Q12824 RNU6-221P-201ENST00000459541 99 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 MTND5P5-201ENST00000503764 376 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 Y_RNA.682-201ENST00000516457 100 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 RNA5SP54-201ENST00000516951 92 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 FRG2DP-202ENST00000566967 323 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 AC018638.8-201ENST00000588755 281 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 AP003465.2-201ENST00000602571 373 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 SNORD11B-201ENST00000607707 90 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 MIR6128-201ENST00000615528 109 ntBASIC1.17□□□□□ -2.22
SMARCB1Q12824 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SMARCB1Q12824 RNU6-595P-201ENST00000363944 107 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 RNU6-596P-201ENST00000365395 98 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 Y_RNA.405-201ENST00000383979 100 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 Y_RNA.451-201ENST00000384200 100 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 Y_RNA.524-201ENST00000384564 100 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 Y_RNA.561-201ENST00000384694 100 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 RNU6-331P-201ENST00000384724 107 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 MIR194-1-201ENST00000384892 85 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 AC009161.1-201ENST00000417306 376 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.16□□□□□ -2.22
SMARCB1Q12824 AC005002.2-201ENST00000438228 269 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 JTBP1-201ENST00000441314 247 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 SNORD5.1-201ENST00000458800 75 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.16□□□□□ -2.22
SMARCB1Q12824 RNU7-128P-201ENST00000517247 62 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 CBX3P8-201ENST00000532412 525 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 MIR4790-201ENST00000577799 79 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 AC136443.5-201ENST00000603741 370 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 MZT1P2-201ENST00000604387 248 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 AC080078.3-201ENST00000605407 463 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 AL355802.3-201ENST00000607571 545 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 AC002553.4-201ENST00000616896 331 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 snoZ196.1-201ENST00000625269 89 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 AC100821.1-201ENST00000523153 2479 ntBASIC1.16□□□□□ -2.22
SMARCB1Q12824 RNU6-1080P-201ENST00000383982 107 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 Y_RNA.573-201ENST00000384763 105 ntBASIC1.15□□□□□ -2.23
SMARCB1Q12824 RNU6-360P-201ENST00000390944 104 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms