Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RNU6-25P-201ENST00000383873 107 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 RNU6-15P-201ENST00000384534 107 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 RNU6-29P-201ENST00000384637 107 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 MIR526A1-201ENST00000384897 85 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 MIR196A2-201ENST00000385189 110 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 SNORD41-201ENST00000386967 70 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 U8.16-201ENST00000391279 133 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC244250.2-201ENST00000418731 148 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AL353997.1-201ENST00000432936 108 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AL133217.1-201ENST00000450980 425 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.11□□□□□ -2.43
ABCA4P78363 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.11□□□□□ -2.43
ABCA4P78363 RN7SKP164-201ENST00000516138 266 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC007751.1-201ENST00000529260 376 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC103996.1-201ENST00000555468 102 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC064872.1-201ENST00000604823 1072 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 AC131159.1-201ENST00000621854 213 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 U6.108-201ENST00000637764 58 ntBASIC-0.11□□□□□ -2.43
ABCA4P78363 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU4-32P-201ENST00000363404 141 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU6-187P-201ENST00000384139 106 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 MIR145-201ENST00000384967 88 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNA5SP109-201ENST00000391010 116 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 SNORA75.1-201ENST00000391130 148 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AC015818.7-201ENST00000428754 109 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.12□□□□□ -2.43
ABCA4P78363 MTCO1P5-201ENST00000433573 344 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA4P78363 AC087499.7-201ENST00000441958 109 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU7-165P-201ENST00000458864 60 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AC023442.1-201ENST00000531247 422 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA4P78363 MTND5P34-201ENST00000568888 325 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 MIR3681-201ENST00000580089 72 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AC091965.4-201ENST00000607691 587 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AC131235.4-201ENST00000609288 620 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA4P78363 AL391099.1-201ENST00000624635 187 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU6-384P-201ENST00000364900 104 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 U8.7-201ENST00000364940 136 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU6-613P-201ENST00000410412 108 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA4P78363 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.12□□□□□ -2.43
ABCA4P78363 AL035398.1-201ENST00000430869 322 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 MTND2P3-201ENST00000452458 470 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AC005042.3-201ENST00000453230 174 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.12□□□□□ -2.43
ABCA4P78363 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 OR9P1P-201ENST00000496431 281 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA4P78363 MTCO3P27-201ENST00000514397 196 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU6-138P-201ENST00000515952 107 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 RNU2-60P-201ENST00000517290 128 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.12□□□□□ -2.43
ABCA4P78363 AC006600.1-201ENST00000572529 153 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AL139022.2-201ENST00000606934 443 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AC007684.1-201ENST00000609671 477 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AC122133.1-201ENST00000613964 233 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 AL136221.1-201ENST00000621449 509 ntBASIC-0.12□□□□□ -2.43
ABCA4P78363 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
ABCA4P78363 MIR365A-201ENST00000362260 87 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC090960.1-201ENST00000421072 306 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.13□□□□□ -2.43
ABCA4P78363 AL162725.1-201ENST00000435405 301 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.13□□□□□ -2.43
ABCA4P78363 AC009237.7-201ENST00000447357 229 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 RPS29P15-201ENST00000458329 171 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 snoU13.2-201ENST00000459201 104 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA4P78363 RNU6-123P-201ENST00000516163 102 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC027419.1-201ENST00000522976 328 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC112693.2-201ENST00000556538 232 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.13□□□□□ -2.43
ABCA4P78363 MIR4677-201ENST00000584153 80 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC008521.1-201ENST00000587471 187 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AL139286.2-201ENST00000606838 396 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC104260.1-201ENST00000616660 539 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
ABCA4P78363 RNU6-137P-201ENST00000363680 108 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 RNU6-371P-201ENST00000364283 108 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 RNU6-364P-201ENST00000384387 107 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 SNORA40.8-201ENST00000411034 126 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.13□□□□□ -2.43
ABCA4P78363 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.13□□□□□ -2.43
ABCA4P78363 MED13P1-201ENST00000428342 171 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC013470.1-201ENST00000453438 462 ntBASIC-0.13□□□□□ -2.43
ABCA4P78363 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.13□□□□□ -2.43
ABCA4P78363 AC114811.1-201ENST00000507207 168 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms