Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 U6.73-201ENST00000619194 103 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 AC005592.1-201ENST00000566527 1640 ntBASIC-0.68□□□□□ -2.52
UBA52P62987 MIR16-2-201ENST00000362117 81 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU6-336P-201ENST00000364891 107 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 AL049545.1-201ENST00000401856 572 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU2-3P-201ENST00000410144 191 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 AC090960.1-201ENST00000421072 306 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 SNORD57-201ENST00000448188 72 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU6-848P-201ENST00000515948 107 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU6-617P-201ENST00000516147 107 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU6-473P-201ENST00000516164 107 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU6-63P-201ENST00000516690 95 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 AL512347.1-201ENST00000566420 503 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 AL359697.1-201ENST00000624879 587 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 SNORA43.4-201ENST00000629559 138 ntBASIC-0.69□□□□□ -2.52
UBA52P62987 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 RNU6-187P-201ENST00000384139 106 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 MIR586-201ENST00000385035 97 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 MIR196A2-201ENST00000385189 110 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 MIR760-201ENST00000390220 80 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 MTCO2P8-201ENST00000412213 658 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 CALM2P2-201ENST00000428512 440 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 SNAP23P1-201ENST00000433229 246 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.7□□□□□ -2.52
UBA52P62987 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.7□□□□□ -2.52
UBA52P62987 RPL17P19-201ENST00000489069 552 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 AC079395.1-201ENST00000510981 262 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 RNU6-567P-201ENST00000516746 107 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 AC109479.2-201ENST00000517842 174 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.7□□□□□ -2.52
UBA52P62987 MIR3666-201ENST00000607845 111 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 FRG1KP-201ENST00000623592 341 ntBASIC-0.7□□□□□ -2.52
UBA52P62987 RNY4P24-201ENST00000362735 96 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 RNY3P5-201ENST00000384127 102 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 MTND3P20-201ENST00000407663 186 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 ELOCP17-201ENST00000414751 326 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AC015818.7-201ENST00000428754 109 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AC114878.1-201ENST00000441166 358 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AC087499.7-201ENST00000441958 109 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AC079354.2-201ENST00000453523 154 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 RNU7-57P-201ENST00000459540 60 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 RNU6-221P-201ENST00000459541 99 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.71□□□□□ -2.52
UBA52P62987 AL355297.3-201ENST00000604082 446 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AC099785.1-201ENST00000605697 437 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AC010999.1-201ENST00000611856 324 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AL355073.2-201ENST00000612106 557 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AC005562.2-201ENST00000618264 111 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 AL136221.1-201ENST00000621449 509 ntBASIC-0.71□□□□□ -2.52
UBA52P62987 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 RNY3P13-201ENST00000365542 102 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 MIR520C-201ENST00000385005 87 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 MIR1185-2-201ENST00000408687 86 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.72□□□□□ -2.52
UBA52P62987 AC008134.1-201ENST00000420943 193 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 MTND1P32-201ENST00000433043 938 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 SNORA74.3-201ENST00000517108 154 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 MIR3912-201ENST00000577566 105 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 AC004987.4-201ENST00000603383 338 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 AC072039.2-201ENST00000608883 439 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 MIR7107-201ENST00000611489 80 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 snoZ196.1-201ENST00000625269 89 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 MIR499B-201ENST00000636498 73 ntBASIC-0.72□□□□□ -2.52
UBA52P62987 ZNF204P-201ENST00000416749 2397 ntBASIC-0.72□□□□□ -2.53
UBA52P62987 SNORD115-24-201ENST00000363528 82 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 RNU6-580P-201ENST00000365159 107 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 RNU6-650P-201ENST00000365658 111 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 SNORA26-201ENST00000391286 122 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AC012306.1-201ENST00000423267 114 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AC004386.2-201ENST00000441858 148 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AC008628.2-201ENST00000502605 298 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.73□□□□□ -2.53
UBA52P62987 RNU7-28P-201ENST00000516759 62 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.73□□□□□ -2.53
UBA52P62987 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.73□□□□□ -2.53
UBA52P62987 AC087894.1-201ENST00000538359 518 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.73□□□□□ -2.53
UBA52P62987 AC133485.4-201ENST00000561835 220 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AC090897.1-201ENST00000580909 226 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 MIR4676-201ENST00000583078 72 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AC073539.2-201ENST00000597113 165 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AC008250.2-201ENST00000615261 205 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AL591926.4-201ENST00000616895 298 ntBASIC-0.73□□□□□ -2.53
UBA52P62987 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.73□□□□□ -2.53
UBA52P62987 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 SNORA67.2-201ENST00000384300 149 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.74□□□□□ -2.53
UBA52P62987 RPS29P13-201ENST00000402041 169 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms