Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MIR338-201ENST00000636369 67 ntBASIC1.99□□□□□ -2.09
RPS3AP61247 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.99□□□□□ -2.09
RPS3AP61247 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPS3AP61247 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPS3AP61247 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 Y_RNA.315-201ENST00000365117 102 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 Y_RNA.394-201ENST00000383942 103 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 Y_RNA.419-201ENST00000384041 102 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.98□□□□□ -2.09
RPS3AP61247 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 HMGN2P34-201ENST00000437647 269 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 UQCRBP2-201ENST00000447827 297 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 RNU1-40P-201ENST00000516816 164 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 RNU1-97P-201ENST00000516872 164 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.98□□□□□ -2.09
RPS3AP61247 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.98□□□□□ -2.09
RPS3AP61247 AL050343.2-201ENST00000607338 280 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.98□□□□□ -2.09
RPS3AP61247 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.98□□□□□ -2.09
RPS3AP61247 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
RPS3AP61247 RNU6-1115P-201ENST00000362490 106 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 RNA5SP361-201ENST00000362686 118 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 RNU6-1019P-201ENST00000364424 107 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 MIR515-2-201ENST00000384883 83 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 MIR515-1-201ENST00000384884 83 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RPS3AP61247 Y_RNA.579-201ENST00000390939 94 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 Y_RNA.592-201ENST00000410274 109 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 AC016909.1-201ENST00000415916 166 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 MTND4P28-201ENST00000426217 387 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 AC018634.1-201ENST00000437554 401 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.97□□□□□ -2.09
RPS3AP61247 PCNPP5-201ENST00000452246 481 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.97□□□□□ -2.09
RPS3AP61247 MIR4648-201ENST00000580107 72 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 AL133255.1-201ENST00000606374 441 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 AC091932.3-201ENST00000624223 323 ntBASIC1.97□□□□□ -2.09
RPS3AP61247 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
RPS3AP61247 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
RPS3AP61247 AC006026.1-201ENST00000444025 1803 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 MTND5P6-201ENST00000422338 1798 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 RNU6-1266P-201ENST00000362794 105 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 Y_RNA.146-201ENST00000363549 102 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 RNU6-112P-201ENST00000363599 104 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 RNU6-1264P-201ENST00000383891 107 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 RNU6-318P-201ENST00000384283 103 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 Y_RNA.535-201ENST00000384612 99 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS3AP61247 OOSP1P1-201ENST00000423265 274 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 AC007677.1-201ENST00000445757 515 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.96□□□□□ -2.1
RPS3AP61247 AC105758.1-201ENST00000506038 399 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 SCARNA16.3-201ENST00000516595 184 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 RNU6-107P-201ENST00000516643 102 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
RPS3AP61247 MIR3945-201ENST00000581853 98 ntBASIC1.96□□□□□ -2.1
RPS3AP61247 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RPS3AP61247 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPS3AP61247 RNU6-1301P-201ENST00000362724 104 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 RNU6-797P-201ENST00000363101 109 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 SNORA72.2-201ENST00000365028 127 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 Y_RNA.496-201ENST00000384444 101 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 Y_RNA.605-201ENST00000410577 105 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.95□□□□□ -2.1
RPS3AP61247 AC069257.2-201ENST00000441819 155 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 AC010409.1-201ENST00000487382 476 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 AC116312.1-201ENST00000606841 314 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 AC010615.1-201ENST00000594254 1764 ntBASIC1.95□□□□□ -2.1
RPS3AP61247 RNY3P11-201ENST00000364153 102 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 Y_RNA.314-201ENST00000365114 102 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 Y_RNA.463-201ENST00000384271 102 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 RNU6-296P-201ENST00000384608 107 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 MIR520A-201ENST00000384862 85 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 ELOCP21-201ENST00000412558 336 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS3AP61247 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS3AP61247 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.94□□□□□ -2.1
RPS3AP61247 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.94□□□□□ -2.1
RPS3AP61247 RNU6-699P-201ENST00000517081 110 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS3AP61247 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.94□□□□□ -2.1
RPS3AP61247 AC022432.1-201ENST00000595739 310 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 AL357075.2-201ENST00000614906 189 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPS3AP61247 MTND4P29-201ENST00000503122 1372 ntBASIC1.94□□□□□ -2.1
RPS3AP61247 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
RPS3AP61247 MIR410-201ENST00000362222 80 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 Y_RNA.287-201ENST00000364853 94 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 Y_RNA.428-201ENST00000384078 102 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 Y_RNA.498-201ENST00000384460 102 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 RNU6-417P-201ENST00000384712 107 ntBASIC1.93□□□□□ -2.1
RPS3AP61247 EBAG9P1-201ENST00000418955 543 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms