Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.99□□□□□ -2.25
VSX2P58304 SNORA25.14-201ENST00000516481 132 ntBASIC0.99□□□□□ -2.25
VSX2P58304 RNU7-128P-201ENST00000517247 62 ntBASIC0.99□□□□□ -2.25
VSX2P58304 MTND2P38-201ENST00000522536 667 ntBASIC0.99□□□□□ -2.25
VSX2P58304 UBL5P4-201ENST00000562584 236 ntBASIC0.99□□□□□ -2.25
VSX2P58304 AF250324.2-201ENST00000608299 610 ntBASIC0.99□□□□□ -2.25
VSX2P58304 AC103591.3-201ENST00000608684 209 ntBASIC0.99□□□□□ -2.25
VSX2P58304 AC008873.1-201ENST00000625051 138 ntBASIC0.99□□□□□ -2.25
VSX2P58304 MIR222-201ENST00000384992 110 ntBASIC0.98□□□□□ -2.25
VSX2P58304 RNA5SP323-201ENST00000391094 133 ntBASIC0.98□□□□□ -2.25
VSX2P58304 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.98□□□□□ -2.25
VSX2P58304 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
VSX2P58304 SNX2P2-201ENST00000424553 323 ntBASIC0.98□□□□□ -2.25
VSX2P58304 MTCO3P18-201ENST00000440206 761 ntBASIC0.98□□□□□ -2.25
VSX2P58304 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.98□□□□□ -2.25
VSX2P58304 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.98□□□□□ -2.25
VSX2P58304 RPL30P10-201ENST00000488148 337 ntBASIC0.98□□□□□ -2.25
VSX2P58304 RNU6-1146P-201ENST00000516282 102 ntBASIC0.98□□□□□ -2.25
VSX2P58304 RNA5SP454-201ENST00000517231 127 ntBASIC0.98□□□□□ -2.25
VSX2P58304 AC027288.2-201ENST00000553028 243 ntBASIC0.98□□□□□ -2.25
VSX2P58304 MIR3664-201ENST00000579074 99 ntBASIC0.98□□□□□ -2.25
VSX2P58304 AL390123.1-201ENST00000603216 237 ntBASIC0.98□□□□□ -2.25
VSX2P58304 AL078603.1-201ENST00000603824 313 ntBASIC0.98□□□□□ -2.25
VSX2P58304 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.98□□□□□ -2.25
VSX2P58304 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
VSX2P58304 MTND4P12-201ENST00000498999 1377 ntBASIC0.97□□□□□ -2.25
VSX2P58304 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
VSX2P58304 SNORD33-201ENST00000362761 85 ntBASIC0.97□□□□□ -2.25
VSX2P58304 SNORD115-8-201ENST00000363856 82 ntBASIC0.97□□□□□ -2.25
VSX2P58304 RNU4-75P-201ENST00000364621 146 ntBASIC0.97□□□□□ -2.25
VSX2P58304 SNORD115-38-201ENST00000365037 82 ntBASIC0.97□□□□□ -2.25
VSX2P58304 Y_RNA.415-201ENST00000384012 112 ntBASIC0.97□□□□□ -2.25
VSX2P58304 SNORA70.7-201ENST00000384159 133 ntBASIC0.97□□□□□ -2.25
VSX2P58304 RNU6-1031P-201ENST00000384773 107 ntBASIC0.97□□□□□ -2.25
VSX2P58304 MIR1185-2-201ENST00000408687 86 ntBASIC0.97□□□□□ -2.25
VSX2P58304 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.97□□□□□ -2.25
VSX2P58304 RPL30P16-201ENST00000419341 429 ntBASIC0.97□□□□□ -2.25
VSX2P58304 SEPT14P3-201ENST00000439401 183 ntBASIC0.97□□□□□ -2.25
VSX2P58304 AL732372.2-207ENST00000445840 183 ntBASIC0.97□□□□□ -2.25
VSX2P58304 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.97□□□□□ -2.25
VSX2P58304 SEPT14P2-201ENST00000453405 183 ntBASIC0.97□□□□□ -2.25
VSX2P58304 HMGN2P26-201ENST00000463169 339 ntBASIC0.97□□□□□ -2.25
VSX2P58304 SEPT14P4-201ENST00000513445 186 ntBASIC0.97□□□□□ -2.25
VSX2P58304 RNA5SP220-201ENST00000516298 104 ntBASIC0.97□□□□□ -2.25
VSX2P58304 RNU1-142P-201ENST00000516682 145 ntBASIC0.97□□□□□ -2.25
VSX2P58304 RNU6-165P-201ENST00000517170 99 ntBASIC0.97□□□□□ -2.25
VSX2P58304 FO082796.1-201ENST00000523795 183 ntBASIC0.97□□□□□ -2.25
VSX2P58304 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.97□□□□□ -2.25
VSX2P58304 AL162413.1-201ENST00000603198 110 ntBASIC0.97□□□□□ -2.25
VSX2P58304 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
VSX2P58304 DISC2.1-201ENST00000612827 205 ntBASIC0.97□□□□□ -2.25
VSX2P58304 AC040896.1-201ENST00000613819 479 ntBASIC0.97□□□□□ -2.25
VSX2P58304 AC009248.2-201ENST00000619826 254 ntBASIC0.97□□□□□ -2.25
VSX2P58304 MIR8054-201ENST00000620877 86 ntBASIC0.97□□□□□ -2.25
VSX2P58304 AL359697.1-201ENST00000624879 587 ntBASIC0.97□□□□□ -2.25
VSX2P58304 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.97□□□□□ -2.25
VSX2P58304 AC068647.2-201ENST00000637380 353 ntBASIC0.97□□□□□ -2.25
VSX2P58304 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
VSX2P58304 RNU6-451P-201ENST00000362921 107 ntBASIC0.96□□□□□ -2.26
VSX2P58304 RNU6-873P-201ENST00000363833 107 ntBASIC0.96□□□□□ -2.26
VSX2P58304 RNU6-1090P-201ENST00000364065 94 ntBASIC0.96□□□□□ -2.26
VSX2P58304 SNORA72.2-201ENST00000365028 127 ntBASIC0.96□□□□□ -2.26
VSX2P58304 RNU6-128P-201ENST00000383976 107 ntBASIC0.96□□□□□ -2.26
VSX2P58304 RNU6-42P-201ENST00000384165 107 ntBASIC0.96□□□□□ -2.26
VSX2P58304 SNORD116-2-201ENST00000384274 95 ntBASIC0.96□□□□□ -2.26
VSX2P58304 SNORD116-6-201ENST00000384711 96 ntBASIC0.96□□□□□ -2.26
VSX2P58304 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
VSX2P58304 MIR517A-201ENST00000385001 87 ntBASIC0.96□□□□□ -2.26
VSX2P58304 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
VSX2P58304 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VSX2P58304 RNU6-1186P-201ENST00000410429 97 ntBASIC0.96□□□□□ -2.26
VSX2P58304 DYNLT3P2-201ENST00000442517 295 ntBASIC0.96□□□□□ -2.26
VSX2P58304 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.96□□□□□ -2.26
VSX2P58304 AC098826.2-201ENST00000452011 651 ntBASIC0.96□□□□□ -2.26
VSX2P58304 RPS23P4-201ENST00000487908 423 ntBASIC0.96□□□□□ -2.26
VSX2P58304 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.96□□□□□ -2.26
VSX2P58304 RNU6-256P-201ENST00000516747 97 ntBASIC0.96□□□□□ -2.26
VSX2P58304 RNA5SP54-201ENST00000516951 92 ntBASIC0.96□□□□□ -2.26
VSX2P58304 AC024995.1-201ENST00000523014 93 ntBASIC0.96□□□□□ -2.26
VSX2P58304 Y_RNA.100-201ENST00000363141 102 ntBASIC0.95□□□□□ -2.26
VSX2P58304 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
VSX2P58304 RNU4-9P-201ENST00000364951 139 ntBASIC0.95□□□□□ -2.26
VSX2P58304 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
VSX2P58304 RNU6-440P-201ENST00000390882 105 ntBASIC0.95□□□□□ -2.26
VSX2P58304 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.95□□□□□ -2.26
VSX2P58304 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.95□□□□□ -2.26
VSX2P58304 DLGAP5P1-201ENST00000430307 464 ntBASIC0.95□□□□□ -2.26
VSX2P58304 AC091179.3-201ENST00000474761 144 ntBASIC0.95□□□□□ -2.26
VSX2P58304 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.95□□□□□ -2.26
VSX2P58304 MIR5695-201ENST00000579717 85 ntBASIC0.95□□□□□ -2.26
VSX2P58304 PIGPP4-201ENST00000584447 307 ntBASIC0.95□□□□□ -2.26
VSX2P58304 MIR3942-201ENST00000585264 109 ntBASIC0.95□□□□□ -2.26
VSX2P58304 FAM106DP-201ENST00000586416 501 ntBASIC0.95□□□□□ -2.26
VSX2P58304 POLR3GP2-201ENST00000588366 668 ntBASIC0.95□□□□□ -2.26
VSX2P58304 AL355802.3-201ENST00000607571 545 ntBASIC0.95□□□□□ -2.26
VSX2P58304 SNORD11B-201ENST00000607707 90 ntBASIC0.95□□□□□ -2.26
VSX2P58304 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.95□□□□□ -2.26
VSX2P58304 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
VSX2P58304 AC024614.3-201ENST00000637860 256 ntBASIC0.95□□□□□ -2.26
VSX2P58304 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms