Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU6-1050P-201ENST00000410388 107 ntBASIC1.33□□□□□ -2.2
LIM2P55344 Y_RNA.599-201ENST00000410489 109 ntBASIC1.33□□□□□ -2.2
LIM2P55344 RNU2-7P-201ENST00000410794 178 ntBASIC1.33□□□□□ -2.2
LIM2P55344 RPL37P10-201ENST00000412884 288 ntBASIC1.33□□□□□ -2.2
LIM2P55344 AC016909.1-201ENST00000415916 166 ntBASIC1.33□□□□□ -2.2
LIM2P55344 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.33□□□□□ -2.2
LIM2P55344 USP9YP16-201ENST00000430287 407 ntBASIC1.33□□□□□ -2.2
LIM2P55344 MTND3P23-201ENST00000431980 347 ntBASIC1.33□□□□□ -2.2
LIM2P55344 RPS3AP52-201ENST00000435639 297 ntBASIC1.33□□□□□ -2.2
LIM2P55344 HSPE1P9-201ENST00000440046 311 ntBASIC1.33□□□□□ -2.2
LIM2P55344 USP9YP23-201ENST00000455085 407 ntBASIC1.33□□□□□ -2.2
LIM2P55344 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.33□□□□□ -2.2
LIM2P55344 AP000870.1-201ENST00000472927 406 ntBASIC1.33□□□□□ -2.2
LIM2P55344 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.33□□□□□ -2.2
LIM2P55344 Y_RNA.683-201ENST00000516508 93 ntBASIC1.33□□□□□ -2.2
LIM2P55344 RNA5SP437-201ENST00000517249 129 ntBASIC1.33□□□□□ -2.2
LIM2P55344 CBX3P8-201ENST00000532412 525 ntBASIC1.33□□□□□ -2.2
LIM2P55344 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.33□□□□□ -2.2
LIM2P55344 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.33□□□□□ -2.2
LIM2P55344 MIR4422-201ENST00000581938 83 ntBASIC1.33□□□□□ -2.2
LIM2P55344 AC016925.2-201ENST00000605108 242 ntBASIC1.33□□□□□ -2.2
LIM2P55344 AC010999.1-201ENST00000611856 324 ntBASIC1.33□□□□□ -2.2
LIM2P55344 AC006435.5-201ENST00000624486 112 ntBASIC1.33□□□□□ -2.2
LIM2P55344 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.33□□□□□ -2.2
LIM2P55344 AC099654.5-201ENST00000636479 350 ntBASIC1.33□□□□□ -2.2
LIM2P55344 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
LIM2P55344 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
LIM2P55344 Y_RNA.248-201ENST00000364501 109 ntBASIC1.32□□□□□ -2.2
LIM2P55344 RNU4-42P-201ENST00000364738 142 ntBASIC1.32□□□□□ -2.2
LIM2P55344 RNU6-439P-201ENST00000384188 106 ntBASIC1.32□□□□□ -2.2
LIM2P55344 RNU6-601P-201ENST00000384540 107 ntBASIC1.32□□□□□ -2.2
LIM2P55344 MIR548B-201ENST00000385247 97 ntBASIC1.32□□□□□ -2.2
LIM2P55344 MIR190B-201ENST00000401119 79 ntBASIC1.32□□□□□ -2.2
LIM2P55344 MIR1267-201ENST00000408723 78 ntBASIC1.32□□□□□ -2.2
LIM2P55344 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.32□□□□□ -2.2
LIM2P55344 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.32□□□□□ -2.2
LIM2P55344 TOMM22P2-201ENST00000430735 237 ntBASIC1.32□□□□□ -2.2
LIM2P55344 UBE2V1P7-201ENST00000446395 340 ntBASIC1.32□□□□□ -2.2
LIM2P55344 snoU13.9-201ENST00000458927 103 ntBASIC1.32□□□□□ -2.2
LIM2P55344 RPS26P45-201ENST00000471748 340 ntBASIC1.32□□□□□ -2.2
LIM2P55344 Y_RNA.691-201ENST00000516611 103 ntBASIC1.32□□□□□ -2.2
LIM2P55344 AC005668.1-201ENST00000571142 476 ntBASIC1.32□□□□□ -2.2
LIM2P55344 AL355802.3-201ENST00000607571 545 ntBASIC1.32□□□□□ -2.2
LIM2P55344 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
LIM2P55344 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
LIM2P55344 AC006001.4-201ENST00000622243 395 ntBASIC1.32□□□□□ -2.2
LIM2P55344 AL133216.2-202ENST00000634512 349 ntBASIC1.32□□□□□ -2.2
LIM2P55344 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
LIM2P55344 RNU6-845P-201ENST00000362578 103 ntBASIC1.31□□□□□ -2.2
LIM2P55344 SNORD33-201ENST00000362761 85 ntBASIC1.31□□□□□ -2.2
LIM2P55344 RNU6-1266P-201ENST00000362794 105 ntBASIC1.31□□□□□ -2.2
LIM2P55344 Y_RNA.287-201ENST00000364853 94 ntBASIC1.31□□□□□ -2.2
LIM2P55344 Y_RNA.364-201ENST00000365532 101 ntBASIC1.31□□□□□ -2.2
LIM2P55344 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.31□□□□□ -2.2
LIM2P55344 RNU6-281P-201ENST00000384212 103 ntBASIC1.31□□□□□ -2.2
LIM2P55344 RNU6-997P-201ENST00000384725 107 ntBASIC1.31□□□□□ -2.2
LIM2P55344 RN7SKP51-201ENST00000410781 304 ntBASIC1.31□□□□□ -2.2
LIM2P55344 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.31□□□□□ -2.2
LIM2P55344 AC245517.4-201ENST00000448601 281 ntBASIC1.31□□□□□ -2.2
LIM2P55344 RPL31P58-201ENST00000469001 379 ntBASIC1.31□□□□□ -2.2
LIM2P55344 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.31□□□□□ -2.2
LIM2P55344 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.31□□□□□ -2.2
LIM2P55344 AL161670.1-201ENST00000554348 137 ntBASIC1.31□□□□□ -2.2
LIM2P55344 UBL5P4-201ENST00000562584 236 ntBASIC1.31□□□□□ -2.2
LIM2P55344 SNORA77B-201ENST00000578179 125 ntBASIC1.31□□□□□ -2.2
LIM2P55344 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.31□□□□□ -2.2
LIM2P55344 AC005014.2-201ENST00000607795 599 ntBASIC1.31□□□□□ -2.2
LIM2P55344 AC084782.3-201ENST00000612282 578 ntBASIC1.31□□□□□ -2.2
LIM2P55344 AL359075.3-201ENST00000613288 217 ntBASIC1.31□□□□□ -2.2
LIM2P55344 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
LIM2P55344 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
LIM2P55344 CASC19-280ENST00000642102 1351 ntBASIC1.31□□□□□ -2.2
LIM2P55344 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LIM2P55344 MIR126-201ENST00000362291 85 ntBASIC1.3□□□□□ -2.2
LIM2P55344 RNA5SP432-201ENST00000362480 116 ntBASIC1.3□□□□□ -2.2
LIM2P55344 Y_RNA.88-201ENST00000363029 99 ntBASIC1.3□□□□□ -2.2
LIM2P55344 RNY1P16-201ENST00000363063 111 ntBASIC1.3□□□□□ -2.2
LIM2P55344 Y_RNA.140-201ENST00000363474 103 ntBASIC1.3□□□□□ -2.2
LIM2P55344 Y_RNA.415-201ENST00000384012 112 ntBASIC1.3□□□□□ -2.2
LIM2P55344 RNU1-78P-201ENST00000391248 165 ntBASIC1.3□□□□□ -2.2
LIM2P55344 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
LIM2P55344 MTND1P2-201ENST00000430604 821 ntBASIC1.3□□□□□ -2.2
LIM2P55344 snoU13.27-201ENST00000459278 104 ntBASIC1.3□□□□□ -2.2
LIM2P55344 Y_RNA.670-201ENST00000516255 105 ntBASIC1.3□□□□□ -2.2
LIM2P55344 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
LIM2P55344 AK6P2-201ENST00000549020 471 ntBASIC1.3□□□□□ -2.2
LIM2P55344 AL137100.2-201ENST00000555786 315 ntBASIC1.3□□□□□ -2.2
LIM2P55344 AP000942.3-201ENST00000603702 160 ntBASIC1.3□□□□□ -2.2
LIM2P55344 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.3□□□□□ -2.2
LIM2P55344 AC022306.2-201ENST00000617563 647 ntBASIC1.3□□□□□ -2.2
LIM2P55344 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.3□□□□□ -2.2
LIM2P55344 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.3□□□□□ -2.2
LIM2P55344 MTND5P35-201ENST00000557537 1720 ntBASIC1.29□□□□□ -2.2
LIM2P55344 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
LIM2P55344 Y_RNA.106-201ENST00000363189 100 ntBASIC1.29□□□□□ -2.2
LIM2P55344 RNU11-5P-201ENST00000391216 129 ntBASIC1.29□□□□□ -2.2
LIM2P55344 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.29□□□□□ -2.2
LIM2P55344 EIF1P2-201ENST00000428233 350 ntBASIC1.29□□□□□ -2.2
LIM2P55344 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.29□□□□□ -2.2
LIM2P55344 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms