Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 FO393415.2-201ENST00000480085 343 ntBASIC1.48□□□□□ -2.17
GPC3P51654 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.48□□□□□ -2.17
GPC3P51654 RNU6-1146P-201ENST00000516282 102 ntBASIC1.48□□□□□ -2.17
GPC3P51654 AC134698.4-201ENST00000523451 826 ntBASIC1.48□□□□□ -2.17
GPC3P51654 AL590705.4-201ENST00000532209 134 ntBASIC1.48□□□□□ -2.17
GPC3P51654 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.48□□□□□ -2.17
GPC3P51654 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.48□□□□□ -2.17
GPC3P51654 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
GPC3P51654 MIR4742-201ENST00000581069 85 ntBASIC1.48□□□□□ -2.17
GPC3P51654 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.48□□□□□ -2.17
GPC3P51654 SNORD11B-201ENST00000607707 90 ntBASIC1.48□□□□□ -2.17
GPC3P51654 AL353149.1-201ENST00000610667 244 ntBASIC1.48□□□□□ -2.17
GPC3P51654 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
GPC3P51654 ZNF204P-201ENST00000416749 2397 ntBASIC1.48□□□□□ -2.17
GPC3P51654 RNU6-418P-201ENST00000384035 107 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-203P-201ENST00000384038 104 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-17P-201ENST00000384245 107 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-1065P-201ENST00000384513 106 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-18P-201ENST00000384527 107 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-306P-201ENST00000384617 107 ntBASIC1.47□□□□□ -2.17
GPC3P51654 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
GPC3P51654 Y_RNA.599-201ENST00000410489 109 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNA5SP247-201ENST00000411181 105 ntBASIC1.47□□□□□ -2.17
GPC3P51654 COX6CP10-201ENST00000416832 224 ntBASIC1.47□□□□□ -2.17
GPC3P51654 AC099513.1-201ENST00000490423 301 ntBASIC1.47□□□□□ -2.17
GPC3P51654 MTND5P5-201ENST00000503764 376 ntBASIC1.47□□□□□ -2.17
GPC3P51654 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.47□□□□□ -2.17
GPC3P51654 AC011406.1-201ENST00000512440 370 ntBASIC1.47□□□□□ -2.17
GPC3P51654 Y_RNA.682-201ENST00000516457 100 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-1016P-201ENST00000516689 94 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-307P-201ENST00000516743 106 ntBASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-58P-201ENST00000517143 103 ntBASIC1.47□□□□□ -2.17
GPC3P51654 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.47□□□□□ -2.17
GPC3P51654 AP003033.1-201ENST00000527244 415 ntBASIC1.47□□□□□ -2.17
GPC3P51654 DEFB131C-201ENST00000528817 165 ntBASIC1.47□□□□□ -2.17
GPC3P51654 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.47□□□□□ -2.17
GPC3P51654 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.47□□□□□ -2.17
GPC3P51654 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
GPC3P51654 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
GPC3P51654 MIR8070-201ENST00000616510 88 ntBASIC1.47□□□□□ -2.17
GPC3P51654 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.47□□□□□ -2.17
GPC3P51654 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
GPC3P51654 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
GPC3P51654 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
GPC3P51654 RNU6-595P-201ENST00000363944 107 ntBASIC1.46□□□□□ -2.18
GPC3P51654 RNU6-767P-201ENST00000384132 107 ntBASIC1.46□□□□□ -2.18
GPC3P51654 RNU6-975P-201ENST00000384296 105 ntBASIC1.46□□□□□ -2.18
GPC3P51654 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
GPC3P51654 MIR548K-201ENST00000408406 116 ntBASIC1.46□□□□□ -2.18
GPC3P51654 RPL30P13-201ENST00000418873 348 ntBASIC1.46□□□□□ -2.18
GPC3P51654 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.46□□□□□ -2.18
GPC3P51654 NDUFB4P10-201ENST00000452541 359 ntBASIC1.46□□□□□ -2.18
GPC3P51654 snoU13.27-201ENST00000459278 104 ntBASIC1.46□□□□□ -2.18
GPC3P51654 RPL30P10-201ENST00000488148 337 ntBASIC1.46□□□□□ -2.18
GPC3P51654 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.46□□□□□ -2.18
GPC3P51654 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.46□□□□□ -2.18
GPC3P51654 AC005899.2-201ENST00000584353 90 ntBASIC1.46□□□□□ -2.18
GPC3P51654 AC100812.1-201ENST00000607622 580 ntBASIC1.46□□□□□ -2.18
GPC3P51654 AL078596.1-201ENST00000624856 447 ntBASIC1.46□□□□□ -2.18
GPC3P51654 AC008873.1-201ENST00000625051 138 ntBASIC1.46□□□□□ -2.18
GPC3P51654 Y_RNA.166-201ENST00000363730 102 ntBASIC1.45□□□□□ -2.18
GPC3P51654 RNU6-1305P-201ENST00000364353 104 ntBASIC1.45□□□□□ -2.18
GPC3P51654 Y_RNA.248-201ENST00000364501 109 ntBASIC1.45□□□□□ -2.18
GPC3P51654 Y_RNA.482-201ENST00000384377 111 ntBASIC1.45□□□□□ -2.18
GPC3P51654 MIR515-2-201ENST00000384883 83 ntBASIC1.45□□□□□ -2.18
GPC3P51654 MIR515-1-201ENST00000384884 83 ntBASIC1.45□□□□□ -2.18
GPC3P51654 MIR548B-201ENST00000385247 97 ntBASIC1.45□□□□□ -2.18
GPC3P51654 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
GPC3P51654 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.45□□□□□ -2.18
GPC3P51654 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.45□□□□□ -2.18
GPC3P51654 SDAD1P3-201ENST00000427380 333 ntBASIC1.45□□□□□ -2.18
GPC3P51654 AL135790.2-201ENST00000437701 267 ntBASIC1.45□□□□□ -2.18
GPC3P51654 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.45□□□□□ -2.18
GPC3P51654 HMGN2P9-201ENST00000476875 229 ntBASIC1.45□□□□□ -2.18
GPC3P51654 Y_RNA.706-201ENST00000516933 99 ntBASIC1.45□□□□□ -2.18
GPC3P51654 AL121579.1-201ENST00000555129 305 ntBASIC1.45□□□□□ -2.18
GPC3P51654 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.45□□□□□ -2.18
GPC3P51654 AC018462.2-201ENST00000605375 395 ntBASIC1.45□□□□□ -2.18
GPC3P51654 AC084782.3-201ENST00000612282 578 ntBASIC1.45□□□□□ -2.18
GPC3P51654 MTND5P35-201ENST00000557537 1720 ntBASIC1.45□□□□□ -2.18
GPC3P51654 CASC19-280ENST00000642102 1351 ntBASIC1.45□□□□□ -2.18
GPC3P51654 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
GPC3P51654 RNU6-53P-201ENST00000365367 106 ntBASIC1.44□□□□□ -2.18
GPC3P51654 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
GPC3P51654 RNU6-159P-201ENST00000391080 106 ntBASIC1.44□□□□□ -2.18
GPC3P51654 SNORA40.6-201ENST00000391153 128 ntBASIC1.44□□□□□ -2.18
GPC3P51654 MRPL35P1-201ENST00000404272 572 ntBASIC1.44□□□□□ -2.18
GPC3P51654 RPL37P10-201ENST00000412884 288 ntBASIC1.44□□□□□ -2.18
GPC3P51654 RPL30P16-201ENST00000419341 429 ntBASIC1.44□□□□□ -2.18
GPC3P51654 AC008134.1-201ENST00000420943 193 ntBASIC1.44□□□□□ -2.18
GPC3P51654 AC060773.1-201ENST00000421698 310 ntBASIC1.44□□□□□ -2.18
GPC3P51654 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.44□□□□□ -2.18
GPC3P51654 USP9YP30-201ENST00000430729 455 ntBASIC1.44□□□□□ -2.18
GPC3P51654 Z82188.1-201ENST00000436709 154 ntBASIC1.44□□□□□ -2.18
GPC3P51654 AC027119.1-201ENST00000440877 241 ntBASIC1.44□□□□□ -2.18
GPC3P51654 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
GPC3P51654 AC069439.1-201ENST00000494739 167 ntBASIC1.44□□□□□ -2.18
GPC3P51654 SNORA25.14-201ENST00000516481 132 ntBASIC1.44□□□□□ -2.18
GPC3P51654 RNA5SP384-201ENST00000516615 116 ntBASIC1.44□□□□□ -2.18
GPC3P51654 Y_RNA.708-201ENST00000516950 96 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms