Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SNORD77.3-201ENST00000391113 65 ntBASIC3.69□□□□□ -1.82
RNF144AP50876 RNA5SP252-201ENST00000391131 119 ntBASIC3.69□□□□□ -1.82
RNF144AP50876 SNORA71B-202ENST00000439232 272 ntBASIC3.69□□□□□ -1.82
RNF144AP50876 HMGN1P7-201ENST00000491722 313 ntBASIC3.69□□□□□ -1.82
RNF144AP50876 MIR3186-201ENST00000577404 85 ntBASIC3.69□□□□□ -1.82
RNF144AP50876 MIR5047-201ENST00000579212 100 ntBASIC3.69□□□□□ -1.82
RNF144AP50876 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF144AP50876 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF144AP50876 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF144AP50876 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF144AP50876 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RNF144AP50876 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF144AP50876 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF144AP50876 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF144AP50876 RNA5SP399-201ENST00000364003 117 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 RNU6-820P-201ENST00000384273 107 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 MIR520G-201ENST00000385064 90 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 MIR1253-201ENST00000408273 105 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 SNRPGP10-201ENST00000432323 225 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF144AP50876 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF144AP50876 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF144AP50876 MRPS36P2-201ENST00000512569 299 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 RN7SKP12-201ENST00000516275 143 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 AC068339.1-201ENST00000526965 141 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF144AP50876 Y_RNA.818-201ENST00000618813 71 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 MIR2052-201ENST00000636055 55 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF144AP50876 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF144AP50876 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF144AP50876 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF144AP50876 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
RNF144AP50876 IPO8P1-201ENST00000455509 3109 ntBASIC3.68□□□□□ -1.82
RNF144AP50876 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF144AP50876 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RNF144AP50876 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF144AP50876 MIR450A2-201ENST00000385022 100 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 MIR767-201ENST00000390228 109 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 RNA5SP317-201ENST00000410176 116 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 RNA5SP311-201ENST00000411290 116 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 RHEBP3-201ENST00000411920 351 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 HMGN2P18-201ENST00000450680 270 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF144AP50876 RNA5SP315-201ENST00000516340 116 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 RNA5SP143-201ENST00000516936 115 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 RNA5SP312-201ENST00000517068 116 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF144AP50876 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNF144AP50876 AC090115.4-201ENST00000609970 188 ntBASIC3.67□□□□□ -1.82
RNF144AP50876 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNF144AP50876 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF144AP50876 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
RNF144AP50876 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
RNF144AP50876 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF144AP50876 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF144AP50876 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF144AP50876 SNORA19.1-201ENST00000410656 129 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 ARF4P2-201ENST00000430209 526 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 MTATP8P2-201ENST00000435212 202 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 AC233266.1-201ENST00000454518 96 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 RPS26P48-201ENST00000491713 339 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 AC026726.1-201ENST00000512859 601 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 RNU6-1146P-201ENST00000516282 102 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 RNU6-965P-201ENST00000516721 96 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 RNU6-586P-201ENST00000517265 104 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 RNA5SP179-201ENST00000517284 121 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 AC068657.1-201ENST00000520807 306 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 AC141557.1-201ENST00000540982 400 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF144AP50876 AC091167.4-201ENST00000605079 184 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 SNORD115-40-201ENST00000606510 82 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 AC242852.1-201ENST00000612151 96 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 AC006111.3-201ENST00000622137 383 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 AC244015.1-201ENST00000622301 99 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 AC091152.2-201ENST00000591628 2569 ntBASIC3.66□□□□□ -1.82
RNF144AP50876 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF144AP50876 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RNF144AP50876 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
RNF144AP50876 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
RNF144AP50876 SPRR2C-201ENST00000290702 219 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 RNA5SP295-201ENST00000362655 121 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 SNORA70C-201ENST00000384538 135 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 RPS26P8-201ENST00000393490 348 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 AL356095.1-201ENST00000417217 199 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF144AP50876 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF144AP50876 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF144AP50876 SNRPGP13-201ENST00000442212 177 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 RN7SL93P-201ENST00000463035 293 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 Y_RNA.685-201ENST00000516532 108 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 RNY4P20-201ENST00000516678 93 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 RN7SKP282-201ENST00000516824 299 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF144AP50876 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF144AP50876 AC008507.4-201ENST00000585464 127 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 AC022217.4-201ENST00000604389 163 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 MIR8058-201ENST00000615737 89 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 XIST_intron.1-201ENST00000619444 68 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms