Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 RPS29P12-201ENST00000460178 152 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 RN7SL20P-201ENST00000488827 297 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC6A11P48066 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A11P48066 RNU1-143P-201ENST00000516296 146 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 RNA5SP367-201ENST00000516557 118 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AC091564.4-201ENST00000533934 2194 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.06□□□□□ -1.92
SLC6A11P48066 AC025754.2-201ENST00000606491 432 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AC069294.1-201ENST00000608397 350 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 U1.23-201ENST00000610293 146 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AC099778.2-201ENST00000610904 211 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.06□□□□□ -1.92
SLC6A11P48066 RNU1-68P-201ENST00000615382 146 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 U1.39-201ENST00000621562 146 ntBASIC3.06□□□□□ -1.92
SLC6A11P48066 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SLC6A11P48066 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SLC6A11P48066 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC6A11P48066 AC068700.1-201ENST00000565862 3754 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
SLC6A11P48066 Y_RNA.23-201ENST00000362496 106 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 Y_RNA.75-201ENST00000362927 97 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 Y_RNA.456-201ENST00000384232 111 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 AL139095.1-201ENST00000404326 391 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 MIR1185-2-201ENST00000408687 86 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 HSPE1P21-201ENST00000438283 308 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 AC074290.1-201ENST00000448883 135 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 RPS27P29-201ENST00000463110 252 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 RNA5SP356-201ENST00000515972 94 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 RN7SKP164-201ENST00000516138 266 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.05□□□□□ -1.92
SLC6A11P48066 MIR4672-201ENST00000583126 81 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 AC107294.3-201ENST00000609211 526 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 SNORA50A-202ENST00000629536 136 ntBASIC3.05□□□□□ -1.92
SLC6A11P48066 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SLC6A11P48066 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.05□□□□□ -1.92
SLC6A11P48066 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SLC6A11P48066 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC6A11P48066 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC6A11P48066 Y_RNA.24-201ENST00000362508 103 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 RNA5SP383-201ENST00000362934 120 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 Y_RNA.124-201ENST00000363339 93 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 RNU6-1205P-201ENST00000363625 106 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 Y_RNA.310-201ENST00000365063 113 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 RNU6-234P-201ENST00000365229 104 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 Y_RNA.572-201ENST00000384757 98 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 MIR218-1-201ENST00000384999 110 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 SNORA48.8-201ENST00000391324 134 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 MIR548I2-201ENST00000408348 149 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 RPS12P18-201ENST00000442381 270 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 RNU7-141P-201ENST00000459304 62 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 RNU7-57P-201ENST00000459540 60 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 AC006483.1-201ENST00000487308 313 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 AC083906.5-201ENST00000503722 328 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC6A11P48066 AC068657.1-201ENST00000520807 306 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.04□□□□□ -1.92
SLC6A11P48066 RPL12P50-201ENST00000603116 116 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 Y_RNA.802-201ENST00000614892 130 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
SLC6A11P48066 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.04□□□□□ -1.92
SLC6A11P48066 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SLC6A11P48066 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SLC6A11P48066 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SLC6A11P48066 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 RNU6-275P-201ENST00000364910 107 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 Y_RNA.580-201ENST00000391004 95 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 MIR300-201ENST00000401138 83 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 AL355497.1-201ENST00000406262 551 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.03□□□□□ -1.92
SLC6A11P48066 AC114982.1-201ENST00000469402 321 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 RNU6-1007P-201ENST00000516586 107 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 RNU6-586P-201ENST00000517265 104 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 AC027419.1-201ENST00000522976 328 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.03□□□□□ -1.92
SLC6A11P48066 GABRG2-229ENST00000641017 3628 ntBASIC3.03□□□□□ -1.92
SLC6A11P48066 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC6A11P48066 RNU4-84P-201ENST00000364200 139 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 snoU2_19.4-201ENST00000364329 80 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 Y_RNA.291-201ENST00000364886 113 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 Y_RNA.343-201ENST00000365354 112 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 SNORD50.2-201ENST00000365465 70 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 Y_RNA.361-201ENST00000365515 120 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 MIR626-201ENST00000385032 94 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 RNU6-57P-201ENST00000411348 103 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 BMS1P22-201ENST00000414726 313 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 CR769767.1-201ENST00000436337 346 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 ATP5EP1-201ENST00000510257 156 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 MIR4744-201ENST00000581563 82 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 MIR3199-1-201ENST00000582434 88 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 ELOCP29-201ENST00000588193 334 ntBASIC3.02□□□□□ -1.93
SLC6A11P48066 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.02□□□□□ -1.93
SLC6A11P48066 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SLC6A11P48066 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SLC6A11P48066 AL035425.3-201ENST00000564206 4996 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 MIR148B-201ENST00000362252 99 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 RNU6-103P-201ENST00000363686 107 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 Y_RNA.172-201ENST00000363765 102 ntBASIC3.01□□□□□ -1.93
SLC6A11P48066 RNU6-969P-201ENST00000383900 105 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms