Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC095038.3-201ENST00000634439 195 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 AC100810.6-201ENST00000638068 285 ntBASIC1.07□□□□□ -2.24
CXCL12P48061 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCL12P48061 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CXCL12P48061 MIR26B-201ENST00000362251 77 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 Y_RNA.89-201ENST00000363031 102 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 RNU4-40P-201ENST00000364351 143 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 SNORA63D-201ENST00000364359 132 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 RNU4-9P-201ENST00000364951 139 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 MIR586-201ENST00000385035 97 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 MIR1267-201ENST00000408723 78 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 RNA5SP504-201ENST00000410676 117 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 CST2P1-201ENST00000425770 87 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.06□□□□□ -2.24
CXCL12P48061 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.06□□□□□ -2.24
CXCL12P48061 MTCO3P29-201ENST00000432119 779 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 JTBP1-201ENST00000441314 247 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 DAP3P1-201ENST00000441522 278 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 AC112492.4-201ENST00000456549 352 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 RPL31P58-201ENST00000469001 379 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 ACA59.1-201ENST00000515966 143 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 RNU6-1314P-201ENST00000517139 104 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 MTND1P5-201ENST00000517906 940 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.06□□□□□ -2.24
CXCL12P48061 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.06□□□□□ -2.24
CXCL12P48061 AC009033.1-201ENST00000624279 431 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 AL078596.1-201ENST00000624856 447 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 AL359697.1-201ENST00000624879 587 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.06□□□□□ -2.24
CXCL12P48061 AC100821.1-201ENST00000523153 2479 ntBASIC1.06□□□□□ -2.24
CXCL12P48061 snoU2-30.2-201ENST00000362805 70 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 Y_RNA.67-201ENST00000362870 100 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 RNU6-271P-201ENST00000363858 105 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 RNU6-534P-201ENST00000364877 106 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 RNU6-831P-201ENST00000384548 107 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 RNU6-417P-201ENST00000384712 107 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 RNU6-360P-201ENST00000390944 104 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 RNU1-139P-201ENST00000391307 165 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 MIR320B2-201ENST00000408479 138 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 RNU6-373P-201ENST00000411247 98 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 AC016909.1-201ENST00000415916 166 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 EBAG9P1-201ENST00000418955 543 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 AC073910.1-201ENST00000445047 438 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.05□□□□□ -2.24
CXCL12P48061 RPL30P10-201ENST00000488148 337 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.05□□□□□ -2.24
CXCL12P48061 RNU6-1088P-201ENST00000516850 104 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 RNU6-58P-201ENST00000517143 103 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.05□□□□□ -2.24
CXCL12P48061 AC124303.1-201ENST00000605703 360 ntBASIC1.05□□□□□ -2.24
CXCL12P48061 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CXCL12P48061 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.05□□□□□ -2.24
CXCL12P48061 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.05□□□□□ -2.24
CXCL12P48061 SNORD115-8-201ENST00000363856 82 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORD115-32-201ENST00000364079 82 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORD87-201ENST00000364849 89 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 Y_RNA.287-201ENST00000364853 94 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 Y_RNA.295-201ENST00000364918 102 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORD115-38-201ENST00000365037 82 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 Y_RNA.319-201ENST00000365138 92 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORA4.2-201ENST00000365313 147 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORD26-201ENST00000384147 75 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 RNU6-331P-201ENST00000384724 107 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORD116-4-201ENST00000384733 96 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORD115-47-201ENST00000391226 86 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 RNA5SP467-201ENST00000391274 118 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 RPL30P16-201ENST00000419341 429 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.04□□□□□ -2.24
CXCL12P48061 MTATP6P13-201ENST00000438531 667 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.04□□□□□ -2.24
CXCL12P48061 RNU6-864P-201ENST00000516256 108 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORA25.14-201ENST00000516481 132 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 RNU6-344P-201ENST00000516635 111 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 RNA5SP54-201ENST00000516951 92 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.04□□□□□ -2.24
CXCL12P48061 AC027288.2-201ENST00000553028 243 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.04□□□□□ -2.24
CXCL12P48061 AC005730.3-201ENST00000583067 366 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 MIR6857-201ENST00000613267 93 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.04□□□□□ -2.24
CXCL12P48061 MIR8063-201ENST00000621930 81 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 AC008873.1-201ENST00000625051 138 ntBASIC1.04□□□□□ -2.24
CXCL12P48061 RNU6-1059P-201ENST00000363752 98 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 RNU6-873P-201ENST00000363833 107 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 Y_RNA.533-201ENST00000384596 114 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 MIR153-2-201ENST00000385225 87 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.03□□□□□ -2.24
CXCL12P48061 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.03□□□□□ -2.24
CXCL12P48061 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.03□□□□□ -2.24
CXCL12P48061 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 AC074290.1-201ENST00000448883 135 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 RNA5SP481-201ENST00000516814 122 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 AC025647.1-201ENST00000517879 253 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 CYP3A137P-201ENST00000562436 69 ntBASIC1.03□□□□□ -2.24
CXCL12P48061 UBL5P4-201ENST00000562584 236 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms