Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SNORD1A-201ENST00000364968 72 ntBASIC1.31□□□□□ -2.2
RFC4P35249 Y_RNA.402-201ENST00000383972 102 ntBASIC1.31□□□□□ -2.2
RFC4P35249 RNU6-360P-201ENST00000390944 104 ntBASIC1.31□□□□□ -2.2
RFC4P35249 MTCO1P21-201ENST00000416634 589 ntBASIC1.31□□□□□ -2.2
RFC4P35249 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.31□□□□□ -2.2
RFC4P35249 RN7SKP49-201ENST00000516675 260 ntBASIC1.31□□□□□ -2.2
RFC4P35249 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.31□□□□□ -2.2
RFC4P35249 AC019193.3-201ENST00000609144 554 ntBASIC1.31□□□□□ -2.2
RFC4P35249 AC006504.8-201ENST00000621046 635 ntBASIC1.31□□□□□ -2.2
RFC4P35249 AC006001.4-201ENST00000622243 395 ntBASIC1.31□□□□□ -2.2
RFC4P35249 AC095038.3-201ENST00000634439 195 ntBASIC1.31□□□□□ -2.2
RFC4P35249 MIR338-201ENST00000636369 67 ntBASIC1.31□□□□□ -2.2
RFC4P35249 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
RFC4P35249 Y_RNA.100-201ENST00000363141 102 ntBASIC1.3□□□□□ -2.2
RFC4P35249 RNU6-1019P-201ENST00000364424 107 ntBASIC1.3□□□□□ -2.2
RFC4P35249 Y_RNA.414-201ENST00000384011 101 ntBASIC1.3□□□□□ -2.2
RFC4P35249 RNU6-1065P-201ENST00000384513 106 ntBASIC1.3□□□□□ -2.2
RFC4P35249 RNU6-306P-201ENST00000384617 107 ntBASIC1.3□□□□□ -2.2
RFC4P35249 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
RFC4P35249 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.3□□□□□ -2.2
RFC4P35249 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
RFC4P35249 TRBVA-201ENST00000498804 316 ntBASIC1.3□□□□□ -2.2
RFC4P35249 AC105313.1-201ENST00000509121 353 ntBASIC1.3□□□□□ -2.2
RFC4P35249 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.3□□□□□ -2.2
RFC4P35249 AC100810.6-201ENST00000638068 285 ntBASIC1.3□□□□□ -2.2
RFC4P35249 MTND4P5-201ENST00000435821 1374 ntBASIC1.3□□□□□ -2.2
RFC4P35249 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
RFC4P35249 Y_RNA.9-201ENST00000362354 101 ntBASIC1.29□□□□□ -2.2
RFC4P35249 RNU4-12P-201ENST00000365233 139 ntBASIC1.29□□□□□ -2.2
RFC4P35249 SNORD116-11-201ENST00000383882 92 ntBASIC1.29□□□□□ -2.2
RFC4P35249 MIR181A1-201ENST00000385026 110 ntBASIC1.29□□□□□ -2.2
RFC4P35249 RNU6-57P-201ENST00000411348 103 ntBASIC1.29□□□□□ -2.2
RFC4P35249 RPL37P10-201ENST00000412884 288 ntBASIC1.29□□□□□ -2.2
RFC4P35249 ZNF885P-201ENST00000420174 1098 ntBASIC1.29□□□□□ -2.2
RFC4P35249 MTND3P21-201ENST00000433774 331 ntBASIC1.29□□□□□ -2.2
RFC4P35249 AC073910.1-201ENST00000445047 438 ntBASIC1.29□□□□□ -2.2
RFC4P35249 RNU7-57P-201ENST00000459540 60 ntBASIC1.29□□□□□ -2.2
RFC4P35249 RPL31P58-201ENST00000469001 379 ntBASIC1.29□□□□□ -2.2
RFC4P35249 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.29□□□□□ -2.2
RFC4P35249 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.29□□□□□ -2.2
RFC4P35249 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.29□□□□□ -2.2
RFC4P35249 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.29□□□□□ -2.2
RFC4P35249 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.29□□□□□ -2.2
RFC4P35249 CYP3A137P-201ENST00000562436 69 ntBASIC1.29□□□□□ -2.2
RFC4P35249 TPRKBP2-201ENST00000565969 475 ntBASIC1.29□□□□□ -2.2
RFC4P35249 MIR3973-201ENST00000579824 107 ntBASIC1.29□□□□□ -2.2
RFC4P35249 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.29□□□□□ -2.2
RFC4P35249 AL078604.3-201ENST00000615580 211 ntBASIC1.29□□□□□ -2.2
RFC4P35249 RNY4P14-201ENST00000363656 96 ntBASIC1.28□□□□□ -2.2
RFC4P35249 Y_RNA.450-201ENST00000384198 113 ntBASIC1.28□□□□□ -2.2
RFC4P35249 SNORA67.2-201ENST00000384300 149 ntBASIC1.28□□□□□ -2.2
RFC4P35249 Y_RNA.516-201ENST00000384541 124 ntBASIC1.28□□□□□ -2.2
RFC4P35249 RNU6-1235P-201ENST00000384559 107 ntBASIC1.28□□□□□ -2.2
RFC4P35249 RNU6-417P-201ENST00000384712 107 ntBASIC1.28□□□□□ -2.2
RFC4P35249 RNU6-331P-201ENST00000384724 107 ntBASIC1.28□□□□□ -2.2
RFC4P35249 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
RFC4P35249 RNU6-1148P-201ENST00000410992 104 ntBASIC1.28□□□□□ -2.2
RFC4P35249 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.28□□□□□ -2.2
RFC4P35249 AC027119.1-201ENST00000440877 241 ntBASIC1.28□□□□□ -2.2
RFC4P35249 RNU6-498P-201ENST00000459468 107 ntBASIC1.28□□□□□ -2.2
RFC4P35249 RNA5SP481-201ENST00000516814 122 ntBASIC1.28□□□□□ -2.2
RFC4P35249 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.28□□□□□ -2.2
RFC4P35249 AC005730.3-201ENST00000583067 366 ntBASIC1.28□□□□□ -2.2
RFC4P35249 AL050343.2-201ENST00000607338 280 ntBASIC1.28□□□□□ -2.2
RFC4P35249 AC097065.2-201ENST00000608159 533 ntBASIC1.28□□□□□ -2.2
RFC4P35249 AC009033.1-201ENST00000624279 431 ntBASIC1.28□□□□□ -2.2
RFC4P35249 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.28□□□□□ -2.2
RFC4P35249 Y_RNA.89-201ENST00000363031 102 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RNU6-623P-201ENST00000363143 105 ntBASIC1.27□□□□□ -2.21
RFC4P35249 Y_RNA.135-201ENST00000363439 95 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RNU4-38P-201ENST00000364472 129 ntBASIC1.27□□□□□ -2.21
RFC4P35249 SNORA4.2-201ENST00000365313 147 ntBASIC1.27□□□□□ -2.21
RFC4P35249 MIR586-201ENST00000385035 97 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RNA5SP467-201ENST00000391274 118 ntBASIC1.27□□□□□ -2.21
RFC4P35249 MIR320B2-201ENST00000408479 138 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RPL30P16-201ENST00000419341 429 ntBASIC1.27□□□□□ -2.21
RFC4P35249 MTCO3P29-201ENST00000432119 779 ntBASIC1.27□□□□□ -2.21
RFC4P35249 HMGN2P34-201ENST00000437647 269 ntBASIC1.27□□□□□ -2.21
RFC4P35249 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.27□□□□□ -2.21
RFC4P35249 AC114982.1-201ENST00000469402 321 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
RFC4P35249 ACA59.1-201ENST00000515966 143 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RNU6-720P-201ENST00000516363 108 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RNU2-34P-201ENST00000516534 121 ntBASIC1.27□□□□□ -2.21
RFC4P35249 RNU6-58P-201ENST00000517143 103 ntBASIC1.27□□□□□ -2.21
RFC4P35249 MTND1P5-201ENST00000517906 940 ntBASIC1.27□□□□□ -2.21
RFC4P35249 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.27□□□□□ -2.21
RFC4P35249 RN7SL793P-201ENST00000583259 296 ntBASIC1.27□□□□□ -2.21
RFC4P35249 AC124303.1-201ENST00000605703 360 ntBASIC1.27□□□□□ -2.21
RFC4P35249 MIR6857-201ENST00000613267 93 ntBASIC1.27□□□□□ -2.21
RFC4P35249 AL078596.1-201ENST00000624856 447 ntBASIC1.27□□□□□ -2.21
RFC4P35249 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.27□□□□□ -2.21
RFC4P35249 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
RFC4P35249 snoU2-30.2-201ENST00000362805 70 ntBASIC1.26□□□□□ -2.21
RFC4P35249 RNU6-727P-201ENST00000363592 107 ntBASIC1.26□□□□□ -2.21
RFC4P35249 RNU4-40P-201ENST00000364351 143 ntBASIC1.26□□□□□ -2.21
RFC4P35249 SNORA63D-201ENST00000364359 132 ntBASIC1.26□□□□□ -2.21
RFC4P35249 SNORD87-201ENST00000364849 89 ntBASIC1.26□□□□□ -2.21
RFC4P35249 Y_RNA.287-201ENST00000364853 94 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms