Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.5□□□□□ -2.33
RPA3P35244 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.5□□□□□ -2.33
RPA3P35244 AL031667.1-201ENST00000440222 725 ntBASIC0.5□□□□□ -2.33
RPA3P35244 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.5□□□□□ -2.33
RPA3P35244 AL049830.1-201ENST00000468034 425 ntBASIC0.5□□□□□ -2.33
RPA3P35244 MTCO3P38-201ENST00000468910 766 ntBASIC0.5□□□□□ -2.33
RPA3P35244 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.5□□□□□ -2.33
RPA3P35244 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.5□□□□□ -2.33
RPA3P35244 AC022493.2-201ENST00000506122 481 ntBASIC0.5□□□□□ -2.33
RPA3P35244 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.5□□□□□ -2.33
RPA3P35244 PRELID3BP2-201ENST00000605362 201 ntBASIC0.5□□□□□ -2.33
RPA3P35244 SNORA28-201ENST00000606769 126 ntBASIC0.5□□□□□ -2.33
RPA3P35244 MIR8076-201ENST00000611401 83 ntBASIC0.5□□□□□ -2.33
RPA3P35244 AL354950.2-201ENST00000617939 290 ntBASIC0.5□□□□□ -2.33
RPA3P35244 AC072046.2-201ENST00000618366 268 ntBASIC0.5□□□□□ -2.33
RPA3P35244 RNU6-1266P-201ENST00000362794 105 ntBASIC0.49□□□□□ -2.33
RPA3P35244 RNU6-784P-201ENST00000384330 106 ntBASIC0.49□□□□□ -2.33
RPA3P35244 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
RPA3P35244 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.49□□□□□ -2.33
RPA3P35244 NDUFA5P4-201ENST00000436704 385 ntBASIC0.49□□□□□ -2.33
RPA3P35244 AC104332.1-201ENST00000440471 797 ntBASIC0.49□□□□□ -2.33
RPA3P35244 USP9YP29-201ENST00000445112 563 ntBASIC0.49□□□□□ -2.33
RPA3P35244 MTCO2P18-201ENST00000457151 658 ntBASIC0.49□□□□□ -2.33
RPA3P35244 AC091133.4-201ENST00000511142 308 ntBASIC0.49□□□□□ -2.33
RPA3P35244 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.49□□□□□ -2.33
RPA3P35244 AL157687.1-201ENST00000554853 619 ntBASIC0.49□□□□□ -2.33
RPA3P35244 MIR4438-201ENST00000585271 93 ntBASIC0.49□□□□□ -2.33
RPA3P35244 AC092747.3-201ENST00000603769 301 ntBASIC0.49□□□□□ -2.33
RPA3P35244 AL096861.1-201ENST00000610899 123 ntBASIC0.49□□□□□ -2.33
RPA3P35244 AL121757.2-201ENST00000611223 313 ntBASIC0.49□□□□□ -2.33
RPA3P35244 AL050303.3-201ENST00000613704 284 ntBASIC0.49□□□□□ -2.33
RPA3P35244 RMST_2.1-201ENST00000617263 136 ntBASIC0.49□□□□□ -2.33
RPA3P35244 AC103705.1-201ENST00000619013 241 ntBASIC0.49□□□□□ -2.33
RPA3P35244 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
RPA3P35244 CASC19-280ENST00000642102 1351 ntBASIC0.48□□□□□ -2.33
RPA3P35244 Y_RNA.100-201ENST00000363141 102 ntBASIC0.48□□□□□ -2.33
RPA3P35244 Y_RNA.122-201ENST00000363331 96 ntBASIC0.48□□□□□ -2.33
RPA3P35244 U3.8-201ENST00000363675 217 ntBASIC0.48□□□□□ -2.33
RPA3P35244 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
RPA3P35244 Y_RNA.265-201ENST00000364677 108 ntBASIC0.48□□□□□ -2.33
RPA3P35244 RNU1-133P-201ENST00000364867 167 ntBASIC0.48□□□□□ -2.33
RPA3P35244 Y_RNA.381-201ENST00000365666 102 ntBASIC0.48□□□□□ -2.33
RPA3P35244 AL663109.1-201ENST00000411498 844 ntBASIC0.48□□□□□ -2.33
RPA3P35244 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.48□□□□□ -2.33
RPA3P35244 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.48□□□□□ -2.33
RPA3P35244 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.48□□□□□ -2.33
RPA3P35244 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.48□□□□□ -2.33
RPA3P35244 snoU13.25-201ENST00000458945 104 ntBASIC0.48□□□□□ -2.33
RPA3P35244 AC092436.3-201ENST00000511788 257 ntBASIC0.48□□□□□ -2.33
RPA3P35244 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
RPA3P35244 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
RPA3P35244 RNU6-430P-201ENST00000517078 107 ntBASIC0.48□□□□□ -2.33
RPA3P35244 AC027419.1-201ENST00000522976 328 ntBASIC0.48□□□□□ -2.33
RPA3P35244 MIR5692C1-201ENST00000585309 91 ntBASIC0.48□□□□□ -2.33
RPA3P35244 AL360219.1-201ENST00000610230 366 ntBASIC0.48□□□□□ -2.33
RPA3P35244 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
RPA3P35244 RNU6-727P-201ENST00000363592 107 ntBASIC0.47□□□□□ -2.33
RPA3P35244 RNU6-245P-201ENST00000384020 107 ntBASIC0.47□□□□□ -2.33
RPA3P35244 RNY3P9-201ENST00000384727 106 ntBASIC0.47□□□□□ -2.33
RPA3P35244 AL365203.2-201ENST00000423444 196 ntBASIC0.47□□□□□ -2.33
RPA3P35244 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
RPA3P35244 FABP5P4-201ENST00000437203 171 ntBASIC0.47□□□□□ -2.33
RPA3P35244 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.47□□□□□ -2.33
RPA3P35244 AC245047.8-201ENST00000456455 284 ntBASIC0.47□□□□□ -2.33
RPA3P35244 RPS27P22-201ENST00000478056 241 ntBASIC0.47□□□□□ -2.33
RPA3P35244 RNU7-12P-201ENST00000516030 62 ntBASIC0.47□□□□□ -2.33
RPA3P35244 SNORA25.14-201ENST00000516481 132 ntBASIC0.47□□□□□ -2.33
RPA3P35244 RNA5SP54-201ENST00000516951 92 ntBASIC0.47□□□□□ -2.33
RPA3P35244 RNU6-58P-201ENST00000517143 103 ntBASIC0.47□□□□□ -2.33
RPA3P35244 AC023157.2-201ENST00000540596 141 ntBASIC0.47□□□□□ -2.33
RPA3P35244 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.47□□□□□ -2.33
RPA3P35244 AL118558.2-201ENST00000556294 238 ntBASIC0.47□□□□□ -2.33
RPA3P35244 CPDP1-201ENST00000579660 283 ntBASIC0.47□□□□□ -2.33
RPA3P35244 AC087683.1-201ENST00000591187 441 ntBASIC0.47□□□□□ -2.33
RPA3P35244 AC012557.2-201ENST00000605919 418 ntBASIC0.47□□□□□ -2.33
RPA3P35244 AC005609.4-201ENST00000625071 447 ntBASIC0.47□□□□□ -2.33
RPA3P35244 RNU6-137P-201ENST00000363680 108 ntBASIC0.46□□□□□ -2.34
RPA3P35244 Y_RNA.415-201ENST00000384012 112 ntBASIC0.46□□□□□ -2.34
RPA3P35244 RNU6-1158P-201ENST00000391167 107 ntBASIC0.46□□□□□ -2.34
RPA3P35244 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
RPA3P35244 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.46□□□□□ -2.34
RPA3P35244 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
RPA3P35244 MRPS10P2-201ENST00000431226 381 ntBASIC0.46□□□□□ -2.34
RPA3P35244 AL359672.1-201ENST00000442302 409 ntBASIC0.46□□□□□ -2.34
RPA3P35244 MTND1P27-201ENST00000451117 902 ntBASIC0.46□□□□□ -2.34
RPA3P35244 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.46□□□□□ -2.34
RPA3P35244 LINC01399-202ENST00000458450 244 ntBASIC0.46□□□□□ -2.34
RPA3P35244 OR9P1P-201ENST00000496431 281 ntBASIC0.46□□□□□ -2.34
RPA3P35244 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.46□□□□□ -2.34
RPA3P35244 AC004832.4-201ENST00000608952 331 ntBASIC0.46□□□□□ -2.34
RPA3P35244 MIR6513-201ENST00000621188 64 ntBASIC0.46□□□□□ -2.34
RPA3P35244 MIR6079-201ENST00000635807 62 ntBASIC0.46□□□□□ -2.34
RPA3P35244 AC005592.1-201ENST00000566527 1640 ntBASIC0.46□□□□□ -2.34
RPA3P35244 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
RPA3P35244 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RPA3P35244 MIR10B-201ENST00000385011 110 ntBASIC0.45□□□□□ -2.34
RPA3P35244 MRPS10P1-201ENST00000448483 130 ntBASIC0.45□□□□□ -2.34
RPA3P35244 NDUFB4P10-201ENST00000452541 359 ntBASIC0.45□□□□□ -2.34
RPA3P35244 SNORD65B-201ENST00000459126 73 ntBASIC0.45□□□□□ -2.34
RPA3P35244 RNU6-1132P-201ENST00000459214 107 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms