Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 Y_RNA.179-201ENST00000363844 90 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 SNORD1A-201ENST00000364968 72 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 SNORA4.2-201ENST00000365313 147 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 Y_RNA.415-201ENST00000384012 112 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 RNU6-793P-201ENST00000384233 104 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
PTPN6P29350 RPL30P13-201ENST00000418873 348 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 USMG5P1-201ENST00000425964 177 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 USP9YP30-201ENST00000430729 455 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 MTND1P17-201ENST00000448961 204 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 NDUFB4P10-201ENST00000452541 359 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 RPS29P29-201ENST00000456396 171 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 RNU7-34P-201ENST00000459394 64 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 HMGN1P12-201ENST00000499125 195 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 Y_RNA.655-201ENST00000515919 96 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 RNU4-49P-201ENST00000516080 140 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 RNU1-142P-201ENST00000516682 145 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.36□□□□□ -2.19
PTPN6P29350 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PTPN6P29350 RNU6-1266P-201ENST00000362794 105 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 Y_RNA.405-201ENST00000383979 100 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 RNU6-203P-201ENST00000384038 104 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 Y_RNA.451-201ENST00000384200 100 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 Y_RNA.524-201ENST00000384564 100 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 Y_RNA.561-201ENST00000384694 100 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 AP000870.1-201ENST00000472927 406 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 AC091179.3-201ENST00000474761 144 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.35□□□□□ -2.19
PTPN6P29350 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN6P29350 AL163195.1-201ENST00000496941 348 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN6P29350 Y_RNA.675-201ENST00000516389 149 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN6P29350 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN6P29350 RAB11AP2-201ENST00000545905 639 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.35□□□□□ -2.19
PTPN6P29350 AL359075.3-201ENST00000613288 217 ntBASIC1.35□□□□□ -2.19
PTPN6P29350 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.35□□□□□ -2.19
PTPN6P29350 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
PTPN6P29350 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.35□□□□□ -2.19
PTPN6P29350 MIR302D-201ENST00000362275 68 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 RNU6-595P-201ENST00000363944 107 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 Y_RNA.301-201ENST00000364990 103 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.34□□□□□ -2.19
PTPN6P29350 Y_RNA.490-201ENST00000384413 102 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 RNU6-1065P-201ENST00000384513 106 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 AL356776.1-201ENST00000406574 447 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 MIR1277-201ENST00000408536 78 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 MIR1185-2-201ENST00000408687 86 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 AC027119.1-201ENST00000440877 241 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 AC009474.2-201ENST00000451383 136 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 RPS26P45-201ENST00000471748 340 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 AC005840.1-201ENST00000498412 377 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 TRMT112P2-201ENST00000512910 132 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 Y_RNA.682-201ENST00000516457 100 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 Y_RNA.706-201ENST00000516933 99 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.19
PTPN6P29350 MIR5695-201ENST00000579717 85 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
PTPN6P29350 MTND5P35-201ENST00000557537 1720 ntBASIC1.34□□□□□ -2.2
PTPN6P29350 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 MIR10B-201ENST00000385011 110 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 RNA5SP109-201ENST00000391010 116 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 RNU6-510P-201ENST00000391239 108 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 MRPL35P1-201ENST00000404272 572 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.33□□□□□ -2.2
PTPN6P29350 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.33□□□□□ -2.2
PTPN6P29350 AL137100.2-201ENST00000555786 315 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 AC005668.1-201ENST00000571142 476 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.33□□□□□ -2.2
PTPN6P29350 AC018638.8-201ENST00000588755 281 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 AC100812.1-201ENST00000607622 580 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 AC010999.1-201ENST00000611856 324 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 AC073869.6-201ENST00000640656 341 ntBASIC1.33□□□□□ -2.2
PTPN6P29350 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
PTPN6P29350 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
PTPN6P29350 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PTPN6P29350 Y_RNA.48-201ENST00000362710 103 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 Y_RNA.86-201ENST00000363020 111 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 Y_RNA.226-201ENST00000364337 114 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 RNU6-842P-201ENST00000384269 107 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 RPL21P1-201ENST00000399532 476 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 RNU6-1186P-201ENST00000410429 97 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
PTPN6P29350 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.32□□□□□ -2.2
PTPN6P29350 USP9YP16-201ENST00000430287 407 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 MTND3P23-201ENST00000431980 347 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.32□□□□□ -2.2
PTPN6P29350 USP9YP23-201ENST00000455085 407 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 SNORD5.1-201ENST00000458800 75 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 RPL30P7-201ENST00000479312 323 ntBASIC1.32□□□□□ -2.2
PTPN6P29350 AC093303.1-201ENST00000514549 295 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms