Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.22□□□□□ -2.37
RPS4Y1P22090 AC234772.3-201ENST00000602277 528 ntBASIC0.22□□□□□ -2.37
RPS4Y1P22090 AC004223.4-201ENST00000612426 332 ntBASIC0.22□□□□□ -2.37
RPS4Y1P22090 7SK.10-201ENST00000621414 298 ntBASIC0.22□□□□□ -2.37
RPS4Y1P22090 AC010487.4-201ENST00000637027 61 ntBASIC0.22□□□□□ -2.37
RPS4Y1P22090 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
RPS4Y1P22090 RNU6-903P-201ENST00000391270 109 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 MIR320B2-201ENST00000408479 138 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.21□□□□□ -2.38
RPS4Y1P22090 Z99497.1-201ENST00000421282 135 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 MTCYBP10-201ENST00000424905 650 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.21□□□□□ -2.38
RPS4Y1P22090 AL593851.1-201ENST00000426171 157 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.21□□□□□ -2.38
RPS4Y1P22090 MTND4LP16-201ENST00000440828 295 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 AC092436.3-201ENST00000511788 257 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 MRPS36P3-201ENST00000519284 130 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.21□□□□□ -2.38
RPS4Y1P22090 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.21□□□□□ -2.38
RPS4Y1P22090 AC023827.1-201ENST00000569247 97 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 AC011712.1-201ENST00000588959 234 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 SNORD11B-201ENST00000607707 90 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 AC064836.2-201ENST00000609491 462 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 SEPT14P17-201ENST00000617978 177 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 AC137590.2-201ENST00000619709 240 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 OR5AK4P-201ENST00000635912 903 ntBASIC0.21□□□□□ -2.38
RPS4Y1P22090 MIRLET7C-201ENST00000362160 84 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 Y_RNA.100-201ENST00000363141 102 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 Y_RNA.112-201ENST00000363250 102 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 RNU6-137P-201ENST00000363680 108 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 Y_RNA.265-201ENST00000364677 108 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 Y_RNA.330-201ENST00000365230 109 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 RNY1P4-201ENST00000384595 115 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 MIR526A1-201ENST00000384897 85 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.2□□□□□ -2.38
RPS4Y1P22090 RNA5SP511-201ENST00000410487 115 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 AL663109.1-201ENST00000411498 844 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.2□□□□□ -2.38
RPS4Y1P22090 MTCO1P19-201ENST00000443487 500 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
RPS4Y1P22090 NDUFB4P10-201ENST00000452541 359 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.2□□□□□ -2.38
RPS4Y1P22090 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.2□□□□□ -2.38
RPS4Y1P22090 RNU7-12P-201ENST00000516030 62 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.2□□□□□ -2.38
RPS4Y1P22090 HIF1AP1-201ENST00000553642 175 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 MIR4438-201ENST00000585271 93 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 AC122133.1-201ENST00000613964 233 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
RPS4Y1P22090 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.2□□□□□ -2.38
RPS4Y1P22090 MIR6079-201ENST00000635807 62 ntBASIC0.2□□□□□ -2.38
RPS4Y1P22090 AC106754.1-201ENST00000562632 1513 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 MIRLET7D-201ENST00000362263 87 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 RNU6-1317P-201ENST00000364582 104 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 RNY1P8-201ENST00000383970 114 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 RNU6-1067P-201ENST00000384752 107 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.19□□□□□ -2.38
RPS4Y1P22090 MRPS18CP6-201ENST00000423587 223 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 MRPS10P1-201ENST00000448483 130 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 U8.21-201ENST00000459536 136 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AP000870.1-201ENST00000472927 406 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC005178.1-201ENST00000508392 440 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC091133.4-201ENST00000511142 308 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.19□□□□□ -2.38
RPS4Y1P22090 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
RPS4Y1P22090 SCOCP1-201ENST00000554676 349 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC011195.1-201ENST00000578177 177 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC245014.2-201ENST00000603689 287 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC246785.4-201ENST00000605374 287 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC092354.1-201ENST00000606057 376 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.19□□□□□ -2.38
RPS4Y1P22090 AP001506.1-201ENST00000615444 211 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC007014.2-201ENST00000615581 479 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC009161.2-201ENST00000624626 138 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AP000720.1-201ENST00000625091 483 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 AC005592.1-201ENST00000566527 1640 ntBASIC0.19□□□□□ -2.38
RPS4Y1P22090 RNU6-1214P-201ENST00000363650 109 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 SNORD87-201ENST00000364849 89 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 RNU6-245P-201ENST00000384020 107 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 RNU6-456P-201ENST00000384493 107 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
RPS4Y1P22090 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 AL049545.1-201ENST00000401856 572 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 MIR1185-1-201ENST00000408598 86 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.18□□□□□ -2.38
RPS4Y1P22090 AC093019.1-201ENST00000443135 252 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 RNU7-180P-201ENST00000459240 63 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.18□□□□□ -2.38
RPS4Y1P22090 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.18□□□□□ -2.38
RPS4Y1P22090 RNU7-28P-201ENST00000516759 62 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 AP002963.1-201ENST00000530590 184 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 AC027288.2-201ENST00000553028 243 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 7SK.7-201ENST00000603504 247 ntBASIC0.18□□□□□ -2.38
RPS4Y1P22090 AC100810.6-201ENST00000638068 285 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms