Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AF235103.2-201ENST00000525753 346 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 MIR4790-201ENST00000577799 79 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 AC068137.4-201ENST00000638485 296 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 MTND4P12-201ENST00000498999 1377 ntBASIC1.34□□□□□ -2.2
XRCC1P18887 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
XRCC1P18887 Y_RNA.179-201ENST00000363844 90 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 RNU6-593P-201ENST00000364716 112 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 Y_RNA.533-201ENST00000384596 114 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 RNU6-950P-201ENST00000384651 107 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 RNU6-417P-201ENST00000384712 107 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 MIR1185-2-201ENST00000408687 86 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 FCF1P9-201ENST00000412546 282 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 COX6CP10-201ENST00000416832 224 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.33□□□□□ -2.2
XRCC1P18887 SDAD1P3-201ENST00000427380 333 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 USP9YP30-201ENST00000430729 455 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.33□□□□□ -2.2
XRCC1P18887 AC093303.1-201ENST00000514549 295 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.33□□□□□ -2.2
XRCC1P18887 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.33□□□□□ -2.2
XRCC1P18887 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 AC100812.1-201ENST00000607622 580 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 AC139792.2-201ENST00000624218 587 ntBASIC1.33□□□□□ -2.2
XRCC1P18887 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
XRCC1P18887 ICE2P2-201ENST00000483823 2787 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
XRCC1P18887 Y_RNA.287-201ENST00000364853 94 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 Y_RNA.405-201ENST00000383979 100 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 Y_RNA.451-201ENST00000384200 100 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 Y_RNA.524-201ENST00000384564 100 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 Y_RNA.561-201ENST00000384694 100 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 MIR548B-201ENST00000385247 97 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 RNA5SP323-201ENST00000391094 133 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 AC016909.1-201ENST00000415916 166 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 RPL30P16-201ENST00000419341 429 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 AC073910.1-201ENST00000445047 438 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.32□□□□□ -2.2
XRCC1P18887 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.32□□□□□ -2.2
XRCC1P18887 MTND5P5-201ENST00000503764 376 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 RNU1-142P-201ENST00000516682 145 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 Y_RNA.706-201ENST00000516933 99 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 AL121579.1-201ENST00000555129 305 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 AL359075.3-201ENST00000613288 217 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 AL353770.2-201ENST00000620024 78 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 AC100821.1-201ENST00000523153 2479 ntBASIC1.32□□□□□ -2.2
XRCC1P18887 RNU6-1266P-201ENST00000362794 105 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 Y_RNA.86-201ENST00000363020 111 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
XRCC1P18887 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 AC091179.3-201ENST00000474761 144 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 AC005840.1-201ENST00000498412 377 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 TRMT112P2-201ENST00000512910 132 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.31□□□□□ -2.2
XRCC1P18887 RNA5SP445-201ENST00000515889 115 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 CYCSP23-201ENST00000519781 313 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.31□□□□□ -2.2
XRCC1P18887 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.31□□□□□ -2.2
XRCC1P18887 AC010999.1-201ENST00000611856 324 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 AC007014.2-201ENST00000615581 479 ntBASIC1.31□□□□□ -2.2
XRCC1P18887 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
XRCC1P18887 MIR302D-201ENST00000362275 68 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 Y_RNA.72-201ENST00000362894 103 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 RNU6-271P-201ENST00000363858 105 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.3□□□□□ -2.2
XRCC1P18887 RNU6-842P-201ENST00000384269 107 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 MIR10B-201ENST00000385011 110 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 RNU1-139P-201ENST00000391307 165 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.3□□□□□ -2.2
XRCC1P18887 MTND3P8-201ENST00000412909 339 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AC074085.1-201ENST00000413598 418 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.3□□□□□ -2.2
XRCC1P18887 RPS29P29-201ENST00000456396 171 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 RPS26P55-201ENST00000471178 356 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AP000870.1-201ENST00000472927 406 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 HMGN1P12-201ENST00000499125 195 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 RNU6-1114P-201ENST00000516022 107 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 Y_RNA.682-201ENST00000516457 100 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 RNU6-902P-201ENST00000517212 91 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AL137100.2-201ENST00000555786 315 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AC008269.2-201ENST00000561915 1105 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 UBL5P4-201ENST00000562584 236 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 MIR4709-201ENST00000577272 72 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AC022432.1-201ENST00000595739 310 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AC068790.6-201ENST00000602558 258 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 AC018462.2-201ENST00000605375 395 ntBASIC1.3□□□□□ -2.2
XRCC1P18887 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.3□□□□□ -2.2
XRCC1P18887 MTND5P35-201ENST00000557537 1720 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 Y_RNA.4-201ENST00000362333 112 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 RNY1P10-201ENST00000363268 113 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 SNORD87-201ENST00000364849 89 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 SNORD1A-201ENST00000364968 72 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 Y_RNA.327-201ENST00000365201 102 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 Y_RNA.415-201ENST00000384012 112 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
XRCC1P18887 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms