Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.47□□□□□ -2.17
TOP1P11387 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.47□□□□□ -2.17
TOP1P11387 OR2AQ1P-201ENST00000451972 200 ntBASIC1.47□□□□□ -2.17
TOP1P11387 RPL36AP21-201ENST00000490372 323 ntBASIC1.47□□□□□ -2.17
TOP1P11387 RNU6-120P-201ENST00000516077 103 ntBASIC1.47□□□□□ -2.17
TOP1P11387 Y_RNA.708-201ENST00000516950 96 ntBASIC1.47□□□□□ -2.17
TOP1P11387 RAB11AP2-201ENST00000545905 639 ntBASIC1.47□□□□□ -2.17
TOP1P11387 AC093027.1-201ENST00000546698 429 ntBASIC1.47□□□□□ -2.17
TOP1P11387 MIR5701-3-201ENST00000578890 82 ntBASIC1.47□□□□□ -2.17
TOP1P11387 MIR4273-201ENST00000582824 84 ntBASIC1.47□□□□□ -2.17
TOP1P11387 MIR5701-1-201ENST00000585138 82 ntBASIC1.47□□□□□ -2.17
TOP1P11387 AL117336.2-201ENST00000602435 335 ntBASIC1.47□□□□□ -2.17
TOP1P11387 AC016727.2-201ENST00000603988 621 ntBASIC1.47□□□□□ -2.17
TOP1P11387 AC073413.2-201ENST00000604332 360 ntBASIC1.47□□□□□ -2.17
TOP1P11387 MIR5701-2-201ENST00000615634 82 ntBASIC1.47□□□□□ -2.17
TOP1P11387 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.47□□□□□ -2.17
TOP1P11387 AC022513.1-201ENST00000624512 117 ntBASIC1.47□□□□□ -2.17
TOP1P11387 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.47□□□□□ -2.17
TOP1P11387 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TOP1P11387 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TOP1P11387 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
TOP1P11387 Y_RNA.2-201ENST00000362330 96 ntBASIC1.46□□□□□ -2.18
TOP1P11387 RNY1P10-201ENST00000363268 113 ntBASIC1.46□□□□□ -2.18
TOP1P11387 RNU6-867P-201ENST00000364956 107 ntBASIC1.46□□□□□ -2.18
TOP1P11387 RNU6-26P-201ENST00000383985 107 ntBASIC1.46□□□□□ -2.18
TOP1P11387 RNU6-310P-201ENST00000384655 107 ntBASIC1.46□□□□□ -2.18
TOP1P11387 RNU6-1093P-201ENST00000391194 107 ntBASIC1.46□□□□□ -2.18
TOP1P11387 MIR208B-201ENST00000401172 77 ntBASIC1.46□□□□□ -2.18
TOP1P11387 Y_RNA.604-201ENST00000410574 102 ntBASIC1.46□□□□□ -2.18
TOP1P11387 RNU6-370P-201ENST00000411008 104 ntBASIC1.46□□□□□ -2.18
TOP1P11387 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.46□□□□□ -2.18
TOP1P11387 AC123900.1-201ENST00000420390 96 ntBASIC1.46□□□□□ -2.18
TOP1P11387 SNRPEP8-201ENST00000442866 260 ntBASIC1.46□□□□□ -2.18
TOP1P11387 MTCO3P10-201ENST00000455912 772 ntBASIC1.46□□□□□ -2.18
TOP1P11387 Y_RNA.635-201ENST00000459041 101 ntBASIC1.46□□□□□ -2.18
TOP1P11387 AC007215.1-201ENST00000464893 276 ntBASIC1.46□□□□□ -2.18
TOP1P11387 RPS26P55-201ENST00000471178 356 ntBASIC1.46□□□□□ -2.18
TOP1P11387 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.46□□□□□ -2.18
TOP1P11387 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.46□□□□□ -2.18
TOP1P11387 RNU6-567P-201ENST00000516746 107 ntBASIC1.46□□□□□ -2.18
TOP1P11387 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.46□□□□□ -2.18
TOP1P11387 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.46□□□□□ -2.18
TOP1P11387 FRG2DP-202ENST00000566967 323 ntBASIC1.46□□□□□ -2.18
TOP1P11387 AL355375.2-201ENST00000574825 175 ntBASIC1.46□□□□□ -2.18
TOP1P11387 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
TOP1P11387 MTND4LP32-201ENST00000636111 270 ntBASIC1.46□□□□□ -2.18
TOP1P11387 AL669831.3-213ENST00000636676 183 ntBASIC1.46□□□□□ -2.18
TOP1P11387 ZNF299P-201ENST00000406845 1804 ntBASIC1.45□□□□□ -2.18
TOP1P11387 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
TOP1P11387 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
TOP1P11387 SNORD115-32-201ENST00000364079 82 ntBASIC1.45□□□□□ -2.18
TOP1P11387 RNU4-56P-201ENST00000364700 142 ntBASIC1.45□□□□□ -2.18
TOP1P11387 RNU4-9P-201ENST00000364951 139 ntBASIC1.45□□□□□ -2.18
TOP1P11387 RNU6-17P-201ENST00000384245 107 ntBASIC1.45□□□□□ -2.18
TOP1P11387 RNU6-18P-201ENST00000384527 107 ntBASIC1.45□□□□□ -2.18
TOP1P11387 RNU6-296P-201ENST00000384608 107 ntBASIC1.45□□□□□ -2.18
TOP1P11387 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
TOP1P11387 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
TOP1P11387 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TOP1P11387 MTCO3P29-201ENST00000432119 779 ntBASIC1.45□□□□□ -2.18
TOP1P11387 FTH1P12-201ENST00000432137 551 ntBASIC1.45□□□□□ -2.18
TOP1P11387 AC015922.2-201ENST00000435593 184 ntBASIC1.45□□□□□ -2.18
TOP1P11387 JTBP1-201ENST00000441314 247 ntBASIC1.45□□□□□ -2.18
TOP1P11387 AC093019.1-201ENST00000443135 252 ntBASIC1.45□□□□□ -2.18
TOP1P11387 snoU13.30-201ENST00000458951 104 ntBASIC1.45□□□□□ -2.18
TOP1P11387 AC097473.1-201ENST00000508142 408 ntBASIC1.45□□□□□ -2.18
TOP1P11387 ATP5EP1-201ENST00000510257 156 ntBASIC1.45□□□□□ -2.18
TOP1P11387 SCARNA16.2-201ENST00000516520 172 ntBASIC1.45□□□□□ -2.18
TOP1P11387 RNU6-1098P-201ENST00000516772 96 ntBASIC1.45□□□□□ -2.18
TOP1P11387 Y_RNA.718-201ENST00000517110 102 ntBASIC1.45□□□□□ -2.18
TOP1P11387 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.45□□□□□ -2.18
TOP1P11387 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.45□□□□□ -2.18
TOP1P11387 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.45□□□□□ -2.18
TOP1P11387 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.45□□□□□ -2.18
TOP1P11387 MIR4781-201ENST00000585250 76 ntBASIC1.45□□□□□ -2.18
TOP1P11387 C8orf59P2-201ENST00000603441 271 ntBASIC1.45□□□□□ -2.18
TOP1P11387 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.45□□□□□ -2.18
TOP1P11387 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.45□□□□□ -2.18
TOP1P11387 AL121890.5-201ENST00000620848 304 ntBASIC1.45□□□□□ -2.18
TOP1P11387 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.45□□□□□ -2.18
TOP1P11387 MIR1302-1-201ENST00000637932 143 ntBASIC1.45□□□□□ -2.18
TOP1P11387 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.44□□□□□ -2.18
TOP1P11387 RNU6-874P-201ENST00000362390 105 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.58-201ENST00000362807 102 ntBASIC1.44□□□□□ -2.18
TOP1P11387 RNU4-73P-201ENST00000363164 141 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.154-201ENST00000363624 102 ntBASIC1.44□□□□□ -2.18
TOP1P11387 SNORD115-8-201ENST00000363856 82 ntBASIC1.44□□□□□ -2.18
TOP1P11387 SNORD115-38-201ENST00000365037 82 ntBASIC1.44□□□□□ -2.18
TOP1P11387 RNY3P1-201ENST00000365085 102 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.356-201ENST00000365475 113 ntBASIC1.44□□□□□ -2.18
TOP1P11387 RNY3-201ENST00000365484 102 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.387-201ENST00000383918 102 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.405-201ENST00000383979 100 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.451-201ENST00000384200 100 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.490-201ENST00000384413 102 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.524-201ENST00000384564 100 ntBASIC1.44□□□□□ -2.18
TOP1P11387 Y_RNA.561-201ENST00000384694 100 ntBASIC1.44□□□□□ -2.18
TOP1P11387 MIR32-201ENST00000384965 70 ntBASIC1.44□□□□□ -2.18
TOP1P11387 RNU6-360P-201ENST00000390944 104 ntBASIC1.44□□□□□ -2.18
TOP1P11387 SNORA12.2-201ENST00000391040 156 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms