Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC022306.2-201ENST00000617563 647 ntBASIC1.32□□□□□ -2.2
RETP07949 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
RETP07949 RNU6-545P-201ENST00000362681 104 ntBASIC1.31□□□□□ -2.2
RETP07949 Y_RNA.166-201ENST00000363730 102 ntBASIC1.31□□□□□ -2.2
RETP07949 RNU6-1059P-201ENST00000363752 98 ntBASIC1.31□□□□□ -2.2
RETP07949 RNU6-593P-201ENST00000364716 112 ntBASIC1.31□□□□□ -2.2
RETP07949 RNU6-1283P-201ENST00000365314 105 ntBASIC1.31□□□□□ -2.2
RETP07949 Y_RNA.339-201ENST00000365325 102 ntBASIC1.31□□□□□ -2.2
RETP07949 SNORA18.2-201ENST00000383865 132 ntBASIC1.31□□□□□ -2.2
RETP07949 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
RETP07949 AC138393.2-201ENST00000414742 246 ntBASIC1.31□□□□□ -2.2
RETP07949 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.31□□□□□ -2.2
RETP07949 AC107399.1-201ENST00000451226 265 ntBASIC1.31□□□□□ -2.2
RETP07949 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.31□□□□□ -2.2
RETP07949 SNORD5.1-201ENST00000458800 75 ntBASIC1.31□□□□□ -2.2
RETP07949 AC007215.1-201ENST00000464893 276 ntBASIC1.31□□□□□ -2.2
RETP07949 RPS23P5-201ENST00000495419 428 ntBASIC1.31□□□□□ -2.2
RETP07949 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.31□□□□□ -2.2
RETP07949 DEFB131C-201ENST00000528817 165 ntBASIC1.31□□□□□ -2.2
RETP07949 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.31□□□□□ -2.2
RETP07949 AC026470.2-201ENST00000561492 181 ntBASIC1.31□□□□□ -2.2
RETP07949 MIR5696-201ENST00000578474 85 ntBASIC1.31□□□□□ -2.2
RETP07949 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.31□□□□□ -2.2
RETP07949 AC016727.2-201ENST00000603988 621 ntBASIC1.31□□□□□ -2.2
RETP07949 AC073413.2-201ENST00000604332 360 ntBASIC1.31□□□□□ -2.2
RETP07949 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.31□□□□□ -2.2
RETP07949 AC083806.3-201ENST00000614016 455 ntBASIC1.31□□□□□ -2.2
RETP07949 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
RETP07949 SNORD115-32-201ENST00000364079 82 ntBASIC1.3□□□□□ -2.2
RETP07949 SNORD31B-201ENST00000364977 69 ntBASIC1.3□□□□□ -2.2
RETP07949 Y_RNA.390-201ENST00000383932 102 ntBASIC1.3□□□□□ -2.2
RETP07949 RNU6-1080P-201ENST00000383982 107 ntBASIC1.3□□□□□ -2.2
RETP07949 RNU6-203P-201ENST00000384038 104 ntBASIC1.3□□□□□ -2.2
RETP07949 RNU6-842P-201ENST00000384269 107 ntBASIC1.3□□□□□ -2.2
RETP07949 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
RETP07949 RPL37P10-201ENST00000412884 288 ntBASIC1.3□□□□□ -2.2
RETP07949 PDCL2P1-201ENST00000419302 352 ntBASIC1.3□□□□□ -2.2
RETP07949 RPS3AP52-201ENST00000435639 297 ntBASIC1.3□□□□□ -2.2
RETP07949 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.3□□□□□ -2.2
RETP07949 Z82188.1-201ENST00000436709 154 ntBASIC1.3□□□□□ -2.2
RETP07949 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.3□□□□□ -2.2
RETP07949 RNU1-131P-201ENST00000458943 161 ntBASIC1.3□□□□□ -2.2
RETP07949 AC004223.1-201ENST00000479840 271 ntBASIC1.3□□□□□ -2.2
RETP07949 AC103851.1-201ENST00000506833 274 ntBASIC1.3□□□□□ -2.2
RETP07949 AC026782.1-201ENST00000512952 449 ntBASIC1.3□□□□□ -2.2
RETP07949 RNU6-1016P-201ENST00000516689 94 ntBASIC1.3□□□□□ -2.2
RETP07949 SNORA20.3-201ENST00000516880 132 ntBASIC1.3□□□□□ -2.2
RETP07949 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.3□□□□□ -2.2
RETP07949 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.3□□□□□ -2.2
RETP07949 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.3□□□□□ -2.2
RETP07949 RBM11P1-201ENST00000604951 799 ntBASIC1.3□□□□□ -2.2
RETP07949 AC018462.2-201ENST00000605375 395 ntBASIC1.3□□□□□ -2.2
RETP07949 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.3□□□□□ -2.2
RETP07949 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.3□□□□□ -2.2
RETP07949 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.3□□□□□ -2.2
RETP07949 TCL6_2.1-201ENST00000615162 119 ntBASIC1.3□□□□□ -2.2
RETP07949 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.3□□□□□ -2.2
RETP07949 AC005562.2-201ENST00000618264 111 ntBASIC1.3□□□□□ -2.2
RETP07949 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.3□□□□□ -2.2
RETP07949 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.3□□□□□ -2.2
RETP07949 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RETP07949 Y_RNA.184-201ENST00000363884 108 ntBASIC1.29□□□□□ -2.2
RETP07949 Y_RNA.374-201ENST00000365606 101 ntBASIC1.29□□□□□ -2.2
RETP07949 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.29□□□□□ -2.2
RETP07949 Y_RNA.393-201ENST00000383936 102 ntBASIC1.29□□□□□ -2.2
RETP07949 RNU6-418P-201ENST00000384035 107 ntBASIC1.29□□□□□ -2.2
RETP07949 Y_RNA.482-201ENST00000384377 111 ntBASIC1.29□□□□□ -2.2
RETP07949 Y_RNA.533-201ENST00000384596 114 ntBASIC1.29□□□□□ -2.2
RETP07949 MIR222-201ENST00000384992 110 ntBASIC1.29□□□□□ -2.2
RETP07949 RNU6-1050P-201ENST00000410388 107 ntBASIC1.29□□□□□ -2.2
RETP07949 NCOR1P3-201ENST00000420479 303 ntBASIC1.29□□□□□ -2.2
RETP07949 AC098614.3-201ENST00000438957 440 ntBASIC1.29□□□□□ -2.2
RETP07949 AC004386.2-201ENST00000441858 148 ntBASIC1.29□□□□□ -2.2
RETP07949 snoU13.30-201ENST00000458951 104 ntBASIC1.29□□□□□ -2.2
RETP07949 AC116353.2-201ENST00000505332 712 ntBASIC1.29□□□□□ -2.2
RETP07949 Y_RNA.691-201ENST00000516611 103 ntBASIC1.29□□□□□ -2.2
RETP07949 AC005786.1-201ENST00000588553 154 ntBASIC1.29□□□□□ -2.2
RETP07949 7SK.7-201ENST00000603504 247 ntBASIC1.29□□□□□ -2.2
RETP07949 AC068205.3-201ENST00000636385 468 ntBASIC1.29□□□□□ -2.2
RETP07949 ZNF299P-201ENST00000406845 1804 ntBASIC1.29□□□□□ -2.2
RETP07949 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.28□□□□□ -2.2
RETP07949 RNU6-862P-201ENST00000362804 105 ntBASIC1.28□□□□□ -2.2
RETP07949 Y_RNA.88-201ENST00000363029 99 ntBASIC1.28□□□□□ -2.2
RETP07949 SNORD115-8-201ENST00000363856 82 ntBASIC1.28□□□□□ -2.2
RETP07949 RNU6-595P-201ENST00000363944 107 ntBASIC1.28□□□□□ -2.2
RETP07949 SNORD115-38-201ENST00000365037 82 ntBASIC1.28□□□□□ -2.2
RETP07949 SNORD81.2-201ENST00000365153 76 ntBASIC1.28□□□□□ -2.2
RETP07949 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.28□□□□□ -2.2
RETP07949 Y_RNA.473-201ENST00000384333 102 ntBASIC1.28□□□□□ -2.2
RETP07949 Y_RNA.490-201ENST00000384413 102 ntBASIC1.28□□□□□ -2.2
RETP07949 RNU6-1026P-201ENST00000384465 108 ntBASIC1.28□□□□□ -2.2
RETP07949 RNU6-601P-201ENST00000384540 107 ntBASIC1.28□□□□□ -2.2
RETP07949 MIR32-201ENST00000384965 70 ntBASIC1.28□□□□□ -2.2
RETP07949 MIR487A-201ENST00000385009 80 ntBASIC1.28□□□□□ -2.2
RETP07949 MIR153-2-201ENST00000385225 87 ntBASIC1.28□□□□□ -2.2
RETP07949 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.28□□□□□ -2.2
RETP07949 AC243428.1-201ENST00000421099 264 ntBASIC1.28□□□□□ -2.2
RETP07949 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
RETP07949 AC099677.2-201ENST00000436385 175 ntBASIC1.28□□□□□ -2.2
RETP07949 MTND3P10-201ENST00000450967 341 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms