Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 AL139396.1-201ENST00000421137 167 ntBASIC1.4□□□□□ -2.19
MMP1P03956 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.4□□□□□ -2.19
MMP1P03956 MTCO3P8-201ENST00000453691 755 ntBASIC1.4□□□□□ -2.19
MMP1P03956 RNU7-14P-201ENST00000459331 62 ntBASIC1.4□□□□□ -2.19
MMP1P03956 COX6CP14-201ENST00000469580 174 ntBASIC1.4□□□□□ -2.19
MMP1P03956 MTND4P17-201ENST00000470444 350 ntBASIC1.4□□□□□ -2.19
MMP1P03956 HMGN1P12-201ENST00000499125 195 ntBASIC1.4□□□□□ -2.19
MMP1P03956 AC116353.2-201ENST00000505332 712 ntBASIC1.4□□□□□ -2.19
MMP1P03956 AC025465.3-201ENST00000510570 311 ntBASIC1.4□□□□□ -2.19
MMP1P03956 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.4□□□□□ -2.19
MMP1P03956 RNU5F-4P-201ENST00000516581 114 ntBASIC1.4□□□□□ -2.19
MMP1P03956 RNU1-54P-201ENST00000517181 120 ntBASIC1.4□□□□□ -2.19
MMP1P03956 SUMO2P18-201ENST00000518873 252 ntBASIC1.4□□□□□ -2.19
MMP1P03956 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.4□□□□□ -2.19
MMP1P03956 MIR5094-201ENST00000578766 85 ntBASIC1.4□□□□□ -2.19
MMP1P03956 AC080078.3-201ENST00000605407 463 ntBASIC1.4□□□□□ -2.19
MMP1P03956 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.4□□□□□ -2.19
MMP1P03956 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
MMP1P03956 SNORD115-8-201ENST00000363856 82 ntBASIC1.39□□□□□ -2.19
MMP1P03956 SNORD115-32-201ENST00000364079 82 ntBASIC1.39□□□□□ -2.19
MMP1P03956 RNU4-9P-201ENST00000364951 139 ntBASIC1.39□□□□□ -2.19
MMP1P03956 SNORD115-38-201ENST00000365037 82 ntBASIC1.39□□□□□ -2.19
MMP1P03956 RNU6-296P-201ENST00000384608 107 ntBASIC1.39□□□□□ -2.19
MMP1P03956 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
MMP1P03956 MTCO1P44-201ENST00000441935 243 ntBASIC1.39□□□□□ -2.19
MMP1P03956 RPL31P58-201ENST00000469001 379 ntBASIC1.39□□□□□ -2.19
MMP1P03956 PRDX4P1-201ENST00000507189 574 ntBASIC1.39□□□□□ -2.19
MMP1P03956 RNU6-1016P-201ENST00000516689 94 ntBASIC1.39□□□□□ -2.19
MMP1P03956 CBX3P8-201ENST00000532412 525 ntBASIC1.39□□□□□ -2.19
MMP1P03956 AC027288.2-201ENST00000553028 243 ntBASIC1.39□□□□□ -2.19
MMP1P03956 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.39□□□□□ -2.19
MMP1P03956 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.39□□□□□ -2.19
MMP1P03956 AC073413.2-201ENST00000604332 360 ntBASIC1.39□□□□□ -2.19
MMP1P03956 AC005562.2-201ENST00000618264 111 ntBASIC1.39□□□□□ -2.19
MMP1P03956 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.39□□□□□ -2.19
MMP1P03956 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
MMP1P03956 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.38□□□□□ -2.19
MMP1P03956 BX322639.1-202ENST00000423987 2213 ntBASIC1.38□□□□□ -2.19
MMP1P03956 RNU6-545P-201ENST00000362681 104 ntBASIC1.38□□□□□ -2.19
MMP1P03956 RNU6-595P-201ENST00000363944 107 ntBASIC1.38□□□□□ -2.19
MMP1P03956 Y_RNA.404-201ENST00000383978 102 ntBASIC1.38□□□□□ -2.19
MMP1P03956 Y_RNA.474-201ENST00000384341 102 ntBASIC1.38□□□□□ -2.19
MMP1P03956 MIR32-201ENST00000384965 70 ntBASIC1.38□□□□□ -2.19
MMP1P03956 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
MMP1P03956 Y_RNA.594-201ENST00000410373 140 ntBASIC1.38□□□□□ -2.19
MMP1P03956 RNU6-1050P-201ENST00000410388 107 ntBASIC1.38□□□□□ -2.19
MMP1P03956 MTCO3P29-201ENST00000432119 779 ntBASIC1.38□□□□□ -2.19
MMP1P03956 AC004386.2-201ENST00000441858 148 ntBASIC1.38□□□□□ -2.19
MMP1P03956 AC007395.1-201ENST00000451333 677 ntBASIC1.38□□□□□ -2.19
MMP1P03956 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.38□□□□□ -2.19
MMP1P03956 snoU13.30-201ENST00000458951 104 ntBASIC1.38□□□□□ -2.19
MMP1P03956 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.38□□□□□ -2.19
MMP1P03956 RPS23P5-201ENST00000495419 428 ntBASIC1.38□□□□□ -2.19
MMP1P03956 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.38□□□□□ -2.19
MMP1P03956 RNA5SP384-201ENST00000516615 116 ntBASIC1.38□□□□□ -2.19
MMP1P03956 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.38□□□□□ -2.19
MMP1P03956 AC005014.2-201ENST00000607795 599 ntBASIC1.38□□□□□ -2.19
MMP1P03956 AL355073.2-201ENST00000612106 557 ntBASIC1.38□□□□□ -2.19
MMP1P03956 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.38□□□□□ -2.19
MMP1P03956 RNU6-593P-201ENST00000364716 112 ntBASIC1.37□□□□□ -2.19
MMP1P03956 RNU6-17P-201ENST00000384245 107 ntBASIC1.37□□□□□ -2.19
MMP1P03956 SNORA67.2-201ENST00000384300 149 ntBASIC1.37□□□□□ -2.19
MMP1P03956 RNU6-18P-201ENST00000384527 107 ntBASIC1.37□□□□□ -2.19
MMP1P03956 RNA5SP504-201ENST00000410676 117 ntBASIC1.37□□□□□ -2.19
MMP1P03956 RPL37P10-201ENST00000412884 288 ntBASIC1.37□□□□□ -2.19
MMP1P03956 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.37□□□□□ -2.19
MMP1P03956 MTND3P10-201ENST00000450967 341 ntBASIC1.37□□□□□ -2.19
MMP1P03956 AC107399.1-201ENST00000451226 265 ntBASIC1.37□□□□□ -2.19
MMP1P03956 AC010531.2-201ENST00000465012 153 ntBASIC1.37□□□□□ -2.19
MMP1P03956 AC005908.1-201ENST00000468701 347 ntBASIC1.37□□□□□ -2.19
MMP1P03956 RPL7P42-201ENST00000481005 679 ntBASIC1.37□□□□□ -2.19
MMP1P03956 RNU6-58P-201ENST00000517143 103 ntBASIC1.37□□□□□ -2.19
MMP1P03956 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.37□□□□□ -2.19
MMP1P03956 AC026470.2-201ENST00000561492 181 ntBASIC1.37□□□□□ -2.19
MMP1P03956 MIR5701-3-201ENST00000578890 82 ntBASIC1.37□□□□□ -2.19
MMP1P03956 MIR4273-201ENST00000582824 84 ntBASIC1.37□□□□□ -2.19
MMP1P03956 MIR5701-1-201ENST00000585138 82 ntBASIC1.37□□□□□ -2.19
MMP1P03956 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.37□□□□□ -2.19
MMP1P03956 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.37□□□□□ -2.19
MMP1P03956 AC009229.3-201ENST00000608056 282 ntBASIC1.37□□□□□ -2.19
MMP1P03956 TCL6_2.1-201ENST00000615162 119 ntBASIC1.37□□□□□ -2.19
MMP1P03956 MIR5701-2-201ENST00000615634 82 ntBASIC1.37□□□□□ -2.19
MMP1P03956 AC068205.3-201ENST00000636385 468 ntBASIC1.37□□□□□ -2.19
MMP1P03956 TPTEP1-208ENST00000636884 213 ntBASIC1.37□□□□□ -2.19
MMP1P03956 ZNF299P-201ENST00000406845 1804 ntBASIC1.37□□□□□ -2.19
MMP1P03956 ZNF204P-201ENST00000416749 2397 ntBASIC1.37□□□□□ -2.19
MMP1P03956 Y_RNA.354-201ENST00000365448 111 ntBASIC1.36□□□□□ -2.19
MMP1P03956 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
MMP1P03956 Y_RNA.405-201ENST00000383979 100 ntBASIC1.36□□□□□ -2.19
MMP1P03956 Y_RNA.451-201ENST00000384200 100 ntBASIC1.36□□□□□ -2.19
MMP1P03956 Y_RNA.482-201ENST00000384377 111 ntBASIC1.36□□□□□ -2.19
MMP1P03956 RNU6-1026P-201ENST00000384465 108 ntBASIC1.36□□□□□ -2.19
MMP1P03956 RNU6-601P-201ENST00000384540 107 ntBASIC1.36□□□□□ -2.19
MMP1P03956 Y_RNA.524-201ENST00000384564 100 ntBASIC1.36□□□□□ -2.19
MMP1P03956 Y_RNA.561-201ENST00000384694 100 ntBASIC1.36□□□□□ -2.19
MMP1P03956 MIR520E-201ENST00000384867 87 ntBASIC1.36□□□□□ -2.19
MMP1P03956 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.36□□□□□ -2.19
MMP1P03956 AL445305.1-201ENST00000432577 575 ntBASIC1.36□□□□□ -2.19
MMP1P03956 AC098614.3-201ENST00000438957 440 ntBASIC1.36□□□□□ -2.19
MMP1P03956 AL357134.1-201ENST00000445848 426 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms