Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNU6-703P-201ENST00000516946 107 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.75□□□□□ -1.97
COL3A1P02461 AL353997.5-201ENST00000618886 171 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 MIR219B-201ENST00000637023 88 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.75□□□□□ -1.97
COL3A1P02461 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.75□□□□□ -1.97
COL3A1P02461 AC008568.2-201ENST00000623862 2313 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.74□□□□□ -1.97
COL3A1P02461 AF127577.6-201ENST00000623352 2191 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 RNU5B-2P-201ENST00000363036 113 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 Y_RNA.217-201ENST00000364214 105 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 SNORA72.2-201ENST00000365028 127 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 Y_RNA.568-201ENST00000384742 113 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 Y_RNA.629-201ENST00000411368 105 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AC104332.2-201ENST00000429959 156 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AL162725.1-201ENST00000435405 301 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.74□□□□□ -1.97
COL3A1P02461 Y_RNA.641-201ENST00000459414 105 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AC010285.1-201ENST00000470580 392 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AC140059.1-201ENST00000489238 361 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.74□□□□□ -1.97
COL3A1P02461 RNA5SP54-201ENST00000516951 92 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 CYCSP23-201ENST00000519781 313 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.74□□□□□ -1.97
COL3A1P02461 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.74□□□□□ -1.97
COL3A1P02461 UBL5P4-201ENST00000562584 236 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AL133393.1-201ENST00000603277 287 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AC022441.3-201ENST00000605737 136 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AC068831.7-201ENST00000616954 363 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 SNORA50A-202ENST00000629536 136 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 AC080128.1-201ENST00000474389 1917 ntBASIC2.74□□□□□ -1.97
COL3A1P02461 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.73□□□□□ -1.97
COL3A1P02461 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.73□□□□□ -1.97
COL3A1P02461 RNU6-1248P-201ENST00000391096 64 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 AL357139.1-201ENST00000407792 426 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 RNU6-1001P-201ENST00000411265 100 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 AC092047.1-201ENST00000424997 240 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 AL445646.1-201ENST00000431784 216 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.73□□□□□ -1.97
COL3A1P02461 AL512844.2-201ENST00000433990 593 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.73□□□□□ -1.97
COL3A1P02461 MTATP6P7-201ENST00000453315 681 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 snoU13.4-201ENST00000458916 104 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 RNU6-1183P-201ENST00000517054 60 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.73□□□□□ -1.97
COL3A1P02461 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.73□□□□□ -1.97
COL3A1P02461 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.73□□□□□ -1.97
COL3A1P02461 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.73□□□□□ -1.97
COL3A1P02461 AP000942.3-201ENST00000603702 160 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 snoU18.1-201ENST00000629629 71 ntBASIC2.73□□□□□ -1.97
COL3A1P02461 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL3A1P02461 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
COL3A1P02461 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL3A1P02461 Y_RNA.7-201ENST00000362352 102 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 RNU6-942P-201ENST00000363002 107 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 SNORD115-8-201ENST00000363856 82 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 SNORD115-38-201ENST00000365037 82 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 RNU6-1130P-201ENST00000365434 107 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 RNU6-211P-201ENST00000384047 107 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 U8.10-201ENST00000384260 133 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 RNU6-140P-201ENST00000384566 108 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 SNORA22C-201ENST00000384614 134 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 Y_RNA.571-201ENST00000384753 98 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 MIR124-3-201ENST00000384866 87 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 RNU6-131P-201ENST00000391144 107 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 RPL23AP95-201ENST00000426806 265 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 Z82210.1-201ENST00000440037 231 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 GPM6BP3-201ENST00000442797 145 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 AC005840.1-201ENST00000498412 377 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 SNORA70.16-201ENST00000516390 95 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 CR383656.8-201ENST00000549046 145 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 MIR3684-201ENST00000579779 74 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 SNRPGP15-201ENST00000600149 222 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 AC010999.1-201ENST00000611856 324 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.72□□□□□ -1.97
COL3A1P02461 AL109809.4-201ENST00000603520 2185 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
COL3A1P02461 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.72□□□□□ -1.97
COL3A1P02461 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.72□□□□□ -1.97
COL3A1P02461 AL353746.1-201ENST00000566293 6881 ntBASIC2.72□□□□□ -1.97
COL3A1P02461 RNU6-653P-201ENST00000363074 106 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 Y_RNA.215-201ENST00000364204 112 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 RNU6-335P-201ENST00000364563 113 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 SNORD32A-201ENST00000364805 84 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 SNORD116-20-201ENST00000384529 92 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 RNA5SP338-201ENST00000410495 85 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 RNU5E-9P-201ENST00000411164 104 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 AC074117.2-201ENST00000417130 397 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 RPL23AP7-203ENST00000449021 469 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 RPL23AP3-201ENST00000453844 468 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.71□□□□□ -1.97
COL3A1P02461 AC016632.1-201ENST00000503994 196 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.71□□□□□ -1.97
COL3A1P02461 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.71□□□□□ -1.97
COL3A1P02461 HMGB3P3-201ENST00000510526 400 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 AC091874.1-201ENST00000511402 339 ntBASIC2.71□□□□□ -1.97
COL3A1P02461 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.71□□□□□ -1.97
COL3A1P02461 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.71□□□□□ -1.97
COL3A1P02461 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.71□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms