Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU6-991P-201ENST00000516168 107 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 RNU6-1012P-201ENST00000516606 109 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 Y_RNA.721-201ENST00000517207 102 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 AC034114.1-201ENST00000520293 285 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.95□□□□□ -2.1
CLPTM1O96005 MIR4659A-201ENST00000580269 81 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 SNORD11B-201ENST00000607707 90 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 AL021879.1-201ENST00000611756 288 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 MTND5P6-201ENST00000422338 1798 ntBASIC1.95□□□□□ -2.1
CLPTM1O96005 Y_RNA.210-201ENST00000364161 110 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 Y_RNA.458-201ENST00000384240 102 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 Y_RNA.526-201ENST00000384572 110 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 MIR561-201ENST00000385216 97 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 SNORA3.2-201ENST00000408221 125 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 Y_RNA.595-201ENST00000410403 105 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 RNA5SP489-201ENST00000410986 109 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 RPEP5-201ENST00000441137 268 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 UQCRBP2-201ENST00000447827 297 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.94□□□□□ -2.1
CLPTM1O96005 SNORA4.4-201ENST00000515921 135 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 RNU6-1045P-201ENST00000516321 107 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 RNU6-344P-201ENST00000516635 111 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 RNA5SP490-201ENST00000517141 136 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 AC131281.1-201ENST00000522984 164 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 MIR3124-201ENST00000582636 67 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 AC136443.5-201ENST00000603741 370 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 AC025754.2-201ENST00000606491 432 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 AC240442.1-201ENST00000616055 283 ntBASIC1.94□□□□□ -2.1
CLPTM1O96005 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.94□□□□□ -2.1
CLPTM1O96005 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLPTM1O96005 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.94□□□□□ -2.1
CLPTM1O96005 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
CLPTM1O96005 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLPTM1O96005 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLPTM1O96005 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CLPTM1O96005 RNU5F-3P-201ENST00000363767 117 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 RNU6-961P-201ENST00000363893 105 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 RNU6-1026P-201ENST00000384465 108 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 MIR221-201ENST00000385135 110 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 AL079342.1-201ENST00000401460 267 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 MIR1252-201ENST00000408861 65 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.93□□□□□ -2.1
CLPTM1O96005 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 AC009238.1-201ENST00000442165 424 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 AC009237.6-201ENST00000446969 424 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 FCF1P4-201ENST00000448326 183 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 AC007395.1-201ENST00000451333 677 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 MTND5P22-201ENST00000458380 195 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.93□□□□□ -2.1
CLPTM1O96005 AC010655.3-201ENST00000478818 450 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 HMGB3P17-201ENST00000504195 649 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.93□□□□□ -2.1
CLPTM1O96005 AC067942.3-201ENST00000512025 362 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.93□□□□□ -2.1
CLPTM1O96005 AK6P2-201ENST00000549020 471 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.93□□□□□ -2.1
CLPTM1O96005 AL121655.1-201ENST00000605811 308 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 AC068205.3-201ENST00000636385 468 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
CLPTM1O96005 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CLPTM1O96005 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLPTM1O96005 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLPTM1O96005 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLPTM1O96005 RNU6-1305P-201ENST00000364353 104 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 SNORA67.2-201ENST00000384300 149 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 snosnR66.1-201ENST00000391095 99 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.92□□□□□ -2.1
CLPTM1O96005 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 HMGN2P18-201ENST00000450680 270 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 HMGN2P9-201ENST00000476875 229 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 RPL26P26-201ENST00000480251 434 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 MRPS35P2-201ENST00000508242 191 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 RNU6-408P-201ENST00000515910 100 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 RNU6-107P-201ENST00000516643 102 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 RPL17P51-201ENST00000605218 238 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 AC013412.1-201ENST00000610687 192 ntBASIC1.92□□□□□ -2.1
CLPTM1O96005 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.91□□□□□ -2.1
CLPTM1O96005 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CLPTM1O96005 RNU6-1309P-201ENST00000363305 108 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 Y_RNA.380-201ENST00000365663 111 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.91□□□□□ -2.1
CLPTM1O96005 Y_RNA.551-201ENST00000384661 102 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CLPTM1O96005 AL357139.1-201ENST00000407792 426 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 MIR1283-1-201ENST00000408494 87 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 ELOCP21-201ENST00000412558 336 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.91□□□□□ -2.1
CLPTM1O96005 PCNPP5-201ENST00000452246 481 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 RNU6-625P-201ENST00000459412 107 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 HMGN1P10-201ENST00000474557 553 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 AC093259.1-201ENST00000509755 300 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 RNA5SP200-201ENST00000516360 103 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 RNU6-897P-201ENST00000517135 105 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 AP002001.1-203ENST00000534002 267 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 AC018448.1-201ENST00000552843 316 ntBASIC1.91□□□□□ -2.1
CLPTM1O96005 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms