Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC093303.1-201ENST00000514549 295 ntBASIC1.22□□□□□ -2.21
MBD3O95983 RNU7-175P-201ENST00000515915 61 ntBASIC1.22□□□□□ -2.21
MBD3O95983 RNU6-864P-201ENST00000516256 108 ntBASIC1.22□□□□□ -2.21
MBD3O95983 RNU7-99P-201ENST00000516271 62 ntBASIC1.22□□□□□ -2.21
MBD3O95983 AC134698.4-201ENST00000523451 826 ntBASIC1.22□□□□□ -2.21
MBD3O95983 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.22□□□□□ -2.21
MBD3O95983 AK6P2-201ENST00000549020 471 ntBASIC1.22□□□□□ -2.21
MBD3O95983 AP000942.3-201ENST00000603702 160 ntBASIC1.22□□□□□ -2.21
MBD3O95983 AC080013.6-201ENST00000606185 215 ntBASIC1.22□□□□□ -2.21
MBD3O95983 AC097065.2-201ENST00000608159 533 ntBASIC1.22□□□□□ -2.21
MBD3O95983 AF250324.2-201ENST00000608299 610 ntBASIC1.22□□□□□ -2.21
MBD3O95983 AC009248.2-201ENST00000619826 254 ntBASIC1.22□□□□□ -2.21
MBD3O95983 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.22□□□□□ -2.21
MBD3O95983 AC006435.5-201ENST00000624486 112 ntBASIC1.22□□□□□ -2.21
MBD3O95983 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.22□□□□□ -2.21
MBD3O95983 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
MBD3O95983 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
MBD3O95983 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
MBD3O95983 RNU6-623P-201ENST00000363143 105 ntBASIC1.21□□□□□ -2.22
MBD3O95983 RNU6-873P-201ENST00000363833 107 ntBASIC1.21□□□□□ -2.22
MBD3O95983 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
MBD3O95983 RNU6-1031P-201ENST00000384773 107 ntBASIC1.21□□□□□ -2.22
MBD3O95983 FGF7P8-201ENST00000402994 292 ntBASIC1.21□□□□□ -2.22
MBD3O95983 RPL23AP36-201ENST00000413895 458 ntBASIC1.21□□□□□ -2.22
MBD3O95983 TOMM22P2-201ENST00000430735 237 ntBASIC1.21□□□□□ -2.22
MBD3O95983 MTATP6P26-201ENST00000445926 662 ntBASIC1.21□□□□□ -2.22
MBD3O95983 RPL30P10-201ENST00000488148 337 ntBASIC1.21□□□□□ -2.22
MBD3O95983 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.21□□□□□ -2.22
MBD3O95983 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
MBD3O95983 EIF1P4-201ENST00000572664 335 ntBASIC1.21□□□□□ -2.22
MBD3O95983 AL162424.1-201ENST00000602325 221 ntBASIC1.21□□□□□ -2.22
MBD3O95983 AC040896.1-201ENST00000613819 479 ntBASIC1.21□□□□□ -2.22
MBD3O95983 MIR378A-201ENST00000362177 66 ntBASIC1.2□□□□□ -2.22
MBD3O95983 RNU6-1266P-201ENST00000362794 105 ntBASIC1.2□□□□□ -2.22
MBD3O95983 Y_RNA.157-201ENST00000363638 102 ntBASIC1.2□□□□□ -2.22
MBD3O95983 RNU6-1013P-201ENST00000384180 107 ntBASIC1.2□□□□□ -2.22
MBD3O95983 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
MBD3O95983 Y_RNA.573-201ENST00000384763 105 ntBASIC1.2□□□□□ -2.22
MBD3O95983 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
MBD3O95983 RNA5SP109-201ENST00000391010 116 ntBASIC1.2□□□□□ -2.22
MBD3O95983 RNU7-34P-201ENST00000459394 64 ntBASIC1.2□□□□□ -2.22
MBD3O95983 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.2□□□□□ -2.22
MBD3O95983 RNU7-128P-201ENST00000517247 62 ntBASIC1.2□□□□□ -2.22
MBD3O95983 TPRKBP2-201ENST00000565969 475 ntBASIC1.2□□□□□ -2.22
MBD3O95983 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.2□□□□□ -2.22
MBD3O95983 AL390123.1-201ENST00000603216 237 ntBASIC1.2□□□□□ -2.22
MBD3O95983 AC022217.4-201ENST00000604389 163 ntBASIC1.2□□□□□ -2.22
MBD3O95983 AC021506.2-201ENST00000612354 169 ntBASIC1.2□□□□□ -2.22
MBD3O95983 U4.5-201ENST00000617137 123 ntBASIC1.2□□□□□ -2.22
MBD3O95983 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
MBD3O95983 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
MBD3O95983 Y_RNA.179-201ENST00000363844 90 ntBASIC1.19□□□□□ -2.22
MBD3O95983 RNU6-595P-201ENST00000363944 107 ntBASIC1.19□□□□□ -2.22
MBD3O95983 SNORA17.3-201ENST00000391159 129 ntBASIC1.19□□□□□ -2.22
MBD3O95983 MRPL42P3-201ENST00000401492 326 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AC009161.1-201ENST00000417306 376 ntBASIC1.19□□□□□ -2.22
MBD3O95983 Z82205.1-201ENST00000428456 297 ntBASIC1.19□□□□□ -2.22
MBD3O95983 MTATP6P13-201ENST00000438531 667 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.19□□□□□ -2.22
MBD3O95983 AC091179.3-201ENST00000474761 144 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AC105313.1-201ENST00000509121 353 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.19□□□□□ -2.22
MBD3O95983 SNORA31.10-201ENST00000516482 106 ntBASIC1.19□□□□□ -2.22
MBD3O95983 CYCSP23-201ENST00000519781 313 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.19□□□□□ -2.22
MBD3O95983 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
MBD3O95983 MIR3684-201ENST00000579779 74 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AL929325.1-201ENST00000603096 117 ntBASIC1.19□□□□□ -2.22
MBD3O95983 MZT1P2-201ENST00000604387 248 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AL355802.3-201ENST00000607571 545 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AL365434.2-201ENST00000607979 234 ntBASIC1.19□□□□□ -2.22
MBD3O95983 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
MBD3O95983 MIR8054-201ENST00000620877 86 ntBASIC1.19□□□□□ -2.22
MBD3O95983 ZNF299P-201ENST00000406845 1804 ntBASIC1.19□□□□□ -2.22
MBD3O95983 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
MBD3O95983 RNA5SP327-201ENST00000362494 101 ntBASIC1.18□□□□□ -2.22
MBD3O95983 RNU6-1090P-201ENST00000364065 94 ntBASIC1.18□□□□□ -2.22
MBD3O95983 RNU11-5P-201ENST00000391216 129 ntBASIC1.18□□□□□ -2.22
MBD3O95983 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.18□□□□□ -2.22
MBD3O95983 USMG5P1-201ENST00000425964 177 ntBASIC1.18□□□□□ -2.22
MBD3O95983 AC092473.1-201ENST00000441098 221 ntBASIC1.18□□□□□ -2.22
MBD3O95983 AL606517.2-201ENST00000442855 241 ntBASIC1.18□□□□□ -2.22
MBD3O95983 RPL39P38-201ENST00000467018 153 ntBASIC1.18□□□□□ -2.22
MBD3O95983 AL133373.1-201ENST00000497098 94 ntBASIC1.18□□□□□ -2.22
MBD3O95983 AC103851.1-201ENST00000506833 274 ntBASIC1.18□□□□□ -2.22
MBD3O95983 RNA5SP454-201ENST00000517231 127 ntBASIC1.18□□□□□ -2.22
MBD3O95983 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.18□□□□□ -2.22
MBD3O95983 AL590705.4-201ENST00000532209 134 ntBASIC1.18□□□□□ -2.22
MBD3O95983 CYP3A52P-201ENST00000563326 91 ntBASIC1.18□□□□□ -2.22
MBD3O95983 MIR4273-201ENST00000582824 84 ntBASIC1.18□□□□□ -2.22
MBD3O95983 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
MBD3O95983 MIR8065-201ENST00000620577 100 ntBASIC1.18□□□□□ -2.22
MBD3O95983 AL513423.1-201ENST00000621695 132 ntBASIC1.18□□□□□ -2.22
MBD3O95983 SNORD87-201ENST00000364849 89 ntBASIC1.17□□□□□ -2.22
MBD3O95983 MIR10B-201ENST00000385011 110 ntBASIC1.17□□□□□ -2.22
MBD3O95983 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
MBD3O95983 RNU1-139P-201ENST00000391307 165 ntBASIC1.17□□□□□ -2.22
MBD3O95983 RNU4-62P-201ENST00000410125 130 ntBASIC1.17□□□□□ -2.22
MBD3O95983 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.17□□□□□ -2.22
MBD3O95983 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms