Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MIR1294-201ENST00000408503 142 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 AL390729.2-201ENST00000416137 156 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 UQCRBP2-201ENST00000447827 297 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 RNU2-44P-201ENST00000516795 194 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 DEFB131C-201ENST00000528817 165 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 MIR4300-201ENST00000581016 96 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 MIR5006-201ENST00000583027 110 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 AC009831.4-201ENST00000620744 325 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RAPGEF3O95398 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RAPGEF3O95398 Y_RNA.222-201ENST00000364264 102 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 Y_RNA.230-201ENST00000364348 109 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 RNA5SP240-201ENST00000365355 128 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RAPGEF3O95398 MIR95-201ENST00000385072 81 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RAPGEF3O95398 SNORA40.18-201ENST00000391200 128 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 Y_RNA.618-201ENST00000410949 107 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 RNU5A-5P-201ENST00000411054 116 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.23□□□□□ -1.89
RAPGEF3O95398 AC005840.1-201ENST00000498412 377 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 Y_RNA.668-201ENST00000516233 93 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 RN7SKP40-201ENST00000517211 242 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.23□□□□□ -1.89
RAPGEF3O95398 AK6P2-201ENST00000549020 471 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 AC136932.1-201ENST00000574771 208 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 MIR3117-201ENST00000584034 78 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 SNORD11B-201ENST00000607707 90 ntBASIC3.23□□□□□ -1.89
RAPGEF3O95398 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.23□□□□□ -1.89
RAPGEF3O95398 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.23□□□□□ -1.89
RAPGEF3O95398 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.23□□□□□ -1.89
RAPGEF3O95398 SNORA25.6-201ENST00000364121 118 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 RNU6-461P-201ENST00000364195 107 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 RNU6-806P-201ENST00000365147 105 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 Y_RNA.461-201ENST00000384263 103 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 RNU6-121P-201ENST00000410525 99 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 AC096920.1-201ENST00000423991 241 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 AC005002.2-201ENST00000438228 269 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 AL161788.1-201ENST00000441805 169 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 RPS23P5-201ENST00000495419 428 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 RNU6-408P-201ENST00000515910 100 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 RPPH1-2P-201ENST00000516688 293 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.22□□□□□ -1.89
RAPGEF3O95398 AC110588.1-201ENST00000559699 137 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 MIR4423-201ENST00000580922 80 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 ZNF355P-201ENST00000427301 3216 ntBASIC3.22□□□□□ -1.89
RAPGEF3O95398 Y_RNA.26-201ENST00000362539 101 ntBASIC3.21□□□□□ -1.9
RAPGEF3O95398 Y_RNA.105-201ENST00000363182 111 ntBASIC3.21□□□□□ -1.9
RAPGEF3O95398 Y_RNA.288-201ENST00000364854 92 ntBASIC3.21□□□□□ -1.9
RAPGEF3O95398 Y_RNA.376-201ENST00000365638 108 ntBASIC3.21□□□□□ -1.9
RAPGEF3O95398 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.21□□□□□ -1.9
RAPGEF3O95398 AC018448.1-201ENST00000552843 316 ntBASIC3.21□□□□□ -1.9
RAPGEF3O95398 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.21□□□□□ -1.9
RAPGEF3O95398 AL356280.1-201ENST00000603614 379 ntBASIC3.21□□□□□ -1.9
RAPGEF3O95398 AL357075.2-201ENST00000614906 189 ntBASIC3.21□□□□□ -1.9
RAPGEF3O95398 AC068205.3-201ENST00000636385 468 ntBASIC3.21□□□□□ -1.9
RAPGEF3O95398 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAPGEF3O95398 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
RAPGEF3O95398 RNU6-626P-201ENST00000363354 107 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 RNU6-1310P-201ENST00000384153 107 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 Y_RNA.498-201ENST00000384460 102 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 Y_RNA.518-201ENST00000384552 113 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 MT-TG-201ENST00000387429 68 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 AL033519.2-201ENST00000403958 392 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 RNU2-63P-201ENST00000410792 194 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 AC004866.1-201ENST00000411748 78 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 AL139156.1-201ENST00000412785 841 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 AL445687.1-201ENST00000439946 251 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 RNU6-625P-201ENST00000459412 107 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 AC090515.1-201ENST00000465295 476 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.2□□□□□ -1.9
RAPGEF3O95398 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.2□□□□□ -1.9
RAPGEF3O95398 RRN3P3-201ENST00000549207 578 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.2□□□□□ -1.9
RAPGEF3O95398 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.2□□□□□ -1.9
RAPGEF3O95398 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.2□□□□□ -1.9
RAPGEF3O95398 AC006006.1-201ENST00000603082 144 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.2□□□□□ -1.9
RAPGEF3O95398 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.2□□□□□ -1.9
RAPGEF3O95398 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAPGEF3O95398 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RAPGEF3O95398 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.19□□□□□ -1.9
RAPGEF3O95398 MIR410-201ENST00000362222 80 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 RNU6-727P-201ENST00000363592 107 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 RNU6-944P-201ENST00000364023 107 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 SNORA25.9-201ENST00000365087 128 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 RNU6-472P-201ENST00000384299 107 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms