Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 HSPE1P24-201ENST00000450782 238 ntBASIC1.67□□□□□ -2.14
SIX3O95343 RNU7-87P-201ENST00000459343 62 ntBASIC1.67□□□□□ -2.14
SIX3O95343 AP000870.1-201ENST00000472927 406 ntBASIC1.67□□□□□ -2.14
SIX3O95343 RNA5SP182-201ENST00000516064 82 ntBASIC1.67□□□□□ -2.14
SIX3O95343 DNAJC19P9-201ENST00000555084 351 ntBASIC1.67□□□□□ -2.14
SIX3O95343 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.67□□□□□ -2.14
SIX3O95343 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.67□□□□□ -2.14
SIX3O95343 AC016925.2-201ENST00000605108 242 ntBASIC1.67□□□□□ -2.14
SIX3O95343 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.67□□□□□ -2.14
SIX3O95343 PISRT1.1-201ENST00000616930 107 ntBASIC1.67□□□□□ -2.14
SIX3O95343 MIR8063-201ENST00000621930 81 ntBASIC1.67□□□□□ -2.14
SIX3O95343 AC008873.1-201ENST00000625051 138 ntBASIC1.67□□□□□ -2.14
SIX3O95343 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SIX3O95343 RNU6-1240P-201ENST00000365155 104 ntBASIC1.66□□□□□ -2.14
SIX3O95343 RNA5SP190-201ENST00000365222 118 ntBASIC1.66□□□□□ -2.14
SIX3O95343 Y_RNA.490-201ENST00000384413 102 ntBASIC1.66□□□□□ -2.14
SIX3O95343 RNU6-296P-201ENST00000384608 107 ntBASIC1.66□□□□□ -2.14
SIX3O95343 RNU6-174P-201ENST00000410406 106 ntBASIC1.66□□□□□ -2.14
SIX3O95343 MTND3P8-201ENST00000412909 339 ntBASIC1.66□□□□□ -2.14
SIX3O95343 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.66□□□□□ -2.14
SIX3O95343 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.66□□□□□ -2.14
SIX3O95343 USP9YP16-201ENST00000430287 407 ntBASIC1.66□□□□□ -2.14
SIX3O95343 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.66□□□□□ -2.14
SIX3O95343 USP9YP23-201ENST00000455085 407 ntBASIC1.66□□□□□ -2.14
SIX3O95343 SNORD13-201ENST00000459299 104 ntBASIC1.66□□□□□ -2.14
SIX3O95343 AC027575.1-201ENST00000481064 460 ntBASIC1.66□□□□□ -2.14
SIX3O95343 RNU6-1016P-201ENST00000516689 94 ntBASIC1.66□□□□□ -2.14
SIX3O95343 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.66□□□□□ -2.14
SIX3O95343 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
SIX3O95343 AL353149.1-201ENST00000610667 244 ntBASIC1.66□□□□□ -2.14
SIX3O95343 AC084782.3-201ENST00000612282 578 ntBASIC1.66□□□□□ -2.14
SIX3O95343 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
SIX3O95343 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
SIX3O95343 MTND4P12-201ENST00000498999 1377 ntBASIC1.65□□□□□ -2.15
SIX3O95343 Y_RNA.67-201ENST00000362870 100 ntBASIC1.65□□□□□ -2.15
SIX3O95343 RNU6-595P-201ENST00000363944 107 ntBASIC1.65□□□□□ -2.15
SIX3O95343 Y_RNA.415-201ENST00000384012 112 ntBASIC1.65□□□□□ -2.15
SIX3O95343 RNU6-360P-201ENST00000390944 104 ntBASIC1.65□□□□□ -2.15
SIX3O95343 RNU6-159P-201ENST00000391080 106 ntBASIC1.65□□□□□ -2.15
SIX3O95343 AC245047.4-201ENST00000433189 144 ntBASIC1.65□□□□□ -2.15
SIX3O95343 AC073910.1-201ENST00000445047 438 ntBASIC1.65□□□□□ -2.15
SIX3O95343 MTND5P5-201ENST00000503764 376 ntBASIC1.65□□□□□ -2.15
SIX3O95343 RNA5SP437-201ENST00000517249 129 ntBASIC1.65□□□□□ -2.15
SIX3O95343 AC060780.3-201ENST00000589464 80 ntBASIC1.65□□□□□ -2.15
SIX3O95343 AC080078.2-201ENST00000603766 501 ntBASIC1.65□□□□□ -2.15
SIX3O95343 AL355802.3-201ENST00000607571 545 ntBASIC1.65□□□□□ -2.15
SIX3O95343 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.65□□□□□ -2.15
SIX3O95343 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.15
SIX3O95343 AC010999.1-201ENST00000611856 324 ntBASIC1.65□□□□□ -2.15
SIX3O95343 MTND5P35-201ENST00000557537 1720 ntBASIC1.64□□□□□ -2.15
SIX3O95343 Y_RNA.72-201ENST00000362894 103 ntBASIC1.64□□□□□ -2.15
SIX3O95343 U3.8-201ENST00000363675 217 ntBASIC1.64□□□□□ -2.15
SIX3O95343 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
SIX3O95343 Y_RNA.327-201ENST00000365201 102 ntBASIC1.64□□□□□ -2.15
SIX3O95343 Y_RNA.473-201ENST00000384333 102 ntBASIC1.64□□□□□ -2.15
SIX3O95343 RNU6-601P-201ENST00000384540 107 ntBASIC1.64□□□□□ -2.15
SIX3O95343 RNU6-331P-201ENST00000384724 107 ntBASIC1.64□□□□□ -2.15
SIX3O95343 RPL37P10-201ENST00000412884 288 ntBASIC1.64□□□□□ -2.15
SIX3O95343 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.64□□□□□ -2.15
SIX3O95343 SNORD5.1-201ENST00000458800 75 ntBASIC1.64□□□□□ -2.15
SIX3O95343 RNU7-34P-201ENST00000459394 64 ntBASIC1.64□□□□□ -2.15
SIX3O95343 AC005908.1-201ENST00000468701 347 ntBASIC1.64□□□□□ -2.15
SIX3O95343 AC069439.1-201ENST00000494739 167 ntBASIC1.64□□□□□ -2.15
SIX3O95343 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.64□□□□□ -2.15
SIX3O95343 RNU6-358P-201ENST00000516564 75 ntBASIC1.64□□□□□ -2.15
SIX3O95343 RNU1-142P-201ENST00000516682 145 ntBASIC1.64□□□□□ -2.15
SIX3O95343 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.64□□□□□ -2.15
SIX3O95343 CBX3P8-201ENST00000532412 525 ntBASIC1.64□□□□□ -2.15
SIX3O95343 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
SIX3O95343 AC018462.2-201ENST00000605375 395 ntBASIC1.64□□□□□ -2.15
SIX3O95343 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
SIX3O95343 Y_RNA.68-201ENST00000362881 102 ntBASIC1.63□□□□□ -2.15
SIX3O95343 RNU6-593P-201ENST00000364716 112 ntBASIC1.63□□□□□ -2.15
SIX3O95343 RNU6-842P-201ENST00000384269 107 ntBASIC1.63□□□□□ -2.15
SIX3O95343 MIR548B-201ENST00000385247 97 ntBASIC1.63□□□□□ -2.15
SIX3O95343 AL117342.1-201ENST00000404861 406 ntBASIC1.63□□□□□ -2.15
SIX3O95343 MTND3P23-201ENST00000431980 347 ntBASIC1.63□□□□□ -2.15
SIX3O95343 snoU13.27-201ENST00000459278 104 ntBASIC1.63□□□□□ -2.15
SIX3O95343 RNU6-221P-201ENST00000459541 99 ntBASIC1.63□□□□□ -2.15
SIX3O95343 AC091179.3-201ENST00000474761 144 ntBASIC1.63□□□□□ -2.15
SIX3O95343 Y_RNA.708-201ENST00000516950 96 ntBASIC1.63□□□□□ -2.15
SIX3O95343 MTND4LP26-201ENST00000518144 282 ntBASIC1.63□□□□□ -2.15
SIX3O95343 APOOP3-201ENST00000536787 586 ntBASIC1.63□□□□□ -2.15
SIX3O95343 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.63□□□□□ -2.15
SIX3O95343 MIR4709-201ENST00000577272 72 ntBASIC1.63□□□□□ -2.15
SIX3O95343 AL133216.2-202ENST00000634512 349 ntBASIC1.63□□□□□ -2.15
SIX3O95343 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SIX3O95343 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SIX3O95343 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SIX3O95343 Y_RNA.184-201ENST00000363884 108 ntBASIC1.62□□□□□ -2.15
SIX3O95343 Y_RNA.354-201ENST00000365448 111 ntBASIC1.62□□□□□ -2.15
SIX3O95343 SNORA67.2-201ENST00000384300 149 ntBASIC1.62□□□□□ -2.15
SIX3O95343 MIR598-201ENST00000384868 97 ntBASIC1.62□□□□□ -2.15
SIX3O95343 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SIX3O95343 RNU6-1050P-201ENST00000410388 107 ntBASIC1.62□□□□□ -2.15
SIX3O95343 RNU6-1186P-201ENST00000410429 97 ntBASIC1.62□□□□□ -2.15
SIX3O95343 Y_RNA.619-201ENST00000410951 90 ntBASIC1.62□□□□□ -2.15
SIX3O95343 AL353997.1-201ENST00000432936 108 ntBASIC1.62□□□□□ -2.15
SIX3O95343 JTBP1-201ENST00000441314 247 ntBASIC1.62□□□□□ -2.15
SIX3O95343 RPS26P45-201ENST00000471748 340 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms