Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNU6-1329P-201ENST00000365664 107 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 MIR653-201ENST00000385279 96 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 AL663109.1-201ENST00000411498 844 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 RPS3AP1-201ENST00000413190 320 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.51□□□□□ -2.33
UBFD1O14562 RPS26P5-201ENST00000418544 335 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.51□□□□□ -2.33
UBFD1O14562 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.51□□□□□ -2.33
UBFD1O14562 AL445567.1-201ENST00000439121 144 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.51□□□□□ -2.33
UBFD1O14562 AC093850.1-201ENST00000454121 251 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 TPT1P7-201ENST00000458300 517 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 AC092989.1-201ENST00000481235 277 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 SCOCP1-201ENST00000554676 349 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 AL118558.2-201ENST00000556294 238 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 SNRPGP20-201ENST00000604477 205 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 AL121757.2-201ENST00000611223 313 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 AL354950.2-201ENST00000617939 290 ntBASIC0.51□□□□□ -2.33
UBFD1O14562 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
UBFD1O14562 AL589743.1-201ENST00000551932 2712 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 SNORD12-201ENST00000391002 90 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 RNU6-1158P-201ENST00000391167 107 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 AL034345.1-201ENST00000407768 123 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.5□□□□□ -2.33
UBFD1O14562 MTCO3P18-201ENST00000440206 761 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 AC074290.1-201ENST00000448883 135 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 SRRM1P2-201ENST00000464531 1192 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 MTCO3P38-201ENST00000468910 766 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 RPL23AP75-201ENST00000491601 451 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 MTND1P22-201ENST00000510572 951 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 RNU6-496P-201ENST00000516145 99 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 RNU6-415P-201ENST00000516252 97 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 RNA5SP330-201ENST00000517096 96 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 MTND1P5-201ENST00000517906 940 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 MTND1P35-201ENST00000526739 508 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.5□□□□□ -2.33
UBFD1O14562 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.5□□□□□ -2.33
UBFD1O14562 U6.73-201ENST00000619194 103 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 AC137590.2-201ENST00000619709 240 ntBASIC0.5□□□□□ -2.33
UBFD1O14562 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
UBFD1O14562 RNU6-325P-201ENST00000411132 105 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 AC008134.1-201ENST00000420943 193 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 AL353193.1-201ENST00000421444 268 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 AL365203.2-201ENST00000423444 196 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 CALM2P4-201ENST00000430810 426 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 STAG3L5P-204ENST00000443759 179 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.49□□□□□ -2.33
UBFD1O14562 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.49□□□□□ -2.33
UBFD1O14562 TPTE2P5-203ENST00000458118 728 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 snoU13.25-201ENST00000458945 104 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 RNU7-63P-201ENST00000459054 62 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 BET1P1-201ENST00000482276 359 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.49□□□□□ -2.33
UBFD1O14562 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.49□□□□□ -2.33
UBFD1O14562 RNU6-344P-201ENST00000516635 111 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 RNU6-430P-201ENST00000517078 107 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.49□□□□□ -2.33
UBFD1O14562 AC004584.2-201ENST00000570407 410 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 MIR5692C1-201ENST00000585309 91 ntBASIC0.49□□□□□ -2.33
UBFD1O14562 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
UBFD1O14562 Y_RNA.100-201ENST00000363141 102 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 Y_RNA.378-201ENST00000365652 113 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.48□□□□□ -2.33
UBFD1O14562 SNORA80D-201ENST00000384488 135 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 MIR521-1-201ENST00000384902 87 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 SNORA75.2-201ENST00000391138 150 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 SNORA75.3-201ENST00000391231 150 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 MIR942-201ENST00000401111 86 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AL049545.1-201ENST00000401856 572 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AL606923.1-201ENST00000406616 190 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 MIR1185-2-201ENST00000408687 86 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AL358176.2-201ENST00000425769 204 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 USP9YP29-201ENST00000445112 563 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 RPS20P10-201ENST00000451209 253 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.48□□□□□ -2.33
UBFD1O14562 U8.21-201ENST00000459536 136 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.48□□□□□ -2.33
UBFD1O14562 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.48□□□□□ -2.33
UBFD1O14562 RNU6-189P-201ENST00000516120 101 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 RNU7-99P-201ENST00000516271 62 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AC090049.2-201ENST00000550377 109 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AL157687.1-201ENST00000554853 619 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.48□□□□□ -2.33
UBFD1O14562 CPDP1-201ENST00000579660 283 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 MIR3908-201ENST00000579798 126 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.48□□□□□ -2.33
UBFD1O14562 AC024933.1-201ENST00000608472 348 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AC103705.1-201ENST00000619013 241 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 AC091925.1-201ENST00000623204 462 ntBASIC0.48□□□□□ -2.33
UBFD1O14562 RNU6-199P-201ENST00000362954 107 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 RNU6-137P-201ENST00000363680 108 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 RNU4-12P-201ENST00000365233 139 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 RNU6-1335P-201ENST00000365426 107 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 RNY3P9-201ENST00000384727 106 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 MIR200A-201ENST00000384875 90 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 U8.16-201ENST00000391279 133 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
UBFD1O14562 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms