Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PDCD5P2-201ENST00000507570 312 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.67□□□□□ -2.3
UPK1AO00322 AC091133.4-201ENST00000511142 308 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 RNU6-58P-201ENST00000517143 103 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.67□□□□□ -2.3
UPK1AO00322 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.67□□□□□ -2.3
UPK1AO00322 AC104383.1-201ENST00000530297 370 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.67□□□□□ -2.3
UPK1AO00322 AC017083.3-201ENST00000609955 700 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 MIR8070-201ENST00000616510 88 ntBASIC0.67□□□□□ -2.3
UPK1AO00322 Y_RNA.4-201ENST00000362333 112 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 RNU6-727P-201ENST00000363592 107 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 RNU5F-3P-201ENST00000363767 117 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 SNORD115-8-201ENST00000363856 82 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 SNORD115-38-201ENST00000365037 82 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 RNU6-128P-201ENST00000383976 107 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 MIR520E-201ENST00000384867 87 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 MIR153-2-201ENST00000385225 87 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 RNU6-1054P-201ENST00000411293 104 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK1AO00322 AC092447.3-201ENST00000426027 686 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AC245047.7-201ENST00000440265 293 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.66□□□□□ -2.3
UPK1AO00322 SNORD124-201ENST00000459577 104 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 RNU7-128P-201ENST00000517247 62 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AC011604.1-201ENST00000545978 196 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.66□□□□□ -2.3
UPK1AO00322 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.66□□□□□ -2.3
UPK1AO00322 AC010620.1-201ENST00000601088 1102 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AL357312.1-201ENST00000603879 298 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AL020996.3-201ENST00000606617 222 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AC097520.1-201ENST00000624435 385 ntBASIC0.66□□□□□ -2.3
UPK1AO00322 AC008163.1-202ENST00000636004 2889 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 SNORD113-7-201ENST00000363762 77 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 RNU6-873P-201ENST00000363833 107 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 SNORD115-32-201ENST00000364079 82 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 RNU6-280P-201ENST00000364145 104 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 Y_RNA.265-201ENST00000364677 108 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 SNORD114-22-201ENST00000365423 72 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 Y_RNA.409-201ENST00000383990 98 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 MIR200A-201ENST00000384875 90 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 Y_RNA.582-201ENST00000391023 95 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 RNU2-64P-201ENST00000411315 191 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.65□□□□□ -2.31
UPK1AO00322 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK1AO00322 AL445305.1-201ENST00000432577 575 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 AC002429.1-201ENST00000437672 148 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 PCMTD1P1-201ENST00000455560 355 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 RNU7-187P-201ENST00000458985 68 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 RPS27P22-201ENST00000478056 241 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 RNA5SP168-201ENST00000516642 112 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 RN7SKP49-201ENST00000516675 260 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 DEFB108E-201ENST00000524692 240 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.65□□□□□ -2.31
UPK1AO00322 AC007834.2-201ENST00000536310 343 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 FRG2DP-202ENST00000566967 323 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 MIR4438-201ENST00000585271 93 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 FAM106DP-201ENST00000586416 501 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 POLR3GP2-201ENST00000588366 668 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 7SK.7-201ENST00000603504 247 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
UPK1AO00322 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
UPK1AO00322 AC121333.1-201ENST00000567488 2709 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 SNORD50.1-201ENST00000362987 71 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 Y_RNA.415-201ENST00000384012 112 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 SNORA80D-201ENST00000384488 135 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 AL355796.1-201ENST00000406706 323 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 Z82188.1-201ENST00000436709 154 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.64□□□□□ -2.31
UPK1AO00322 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.64□□□□□ -2.31
UPK1AO00322 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.64□□□□□ -2.31
UPK1AO00322 AC083904.1-201ENST00000487828 231 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 SNORD79.1-201ENST00000516069 84 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 AC090142.3-201ENST00000519012 385 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
UPK1AO00322 AC027419.1-201ENST00000522976 328 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 AC090049.2-201ENST00000550377 109 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 MIR6504-201ENST00000613520 61 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
UPK1AO00322 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.64□□□□□ -2.31
UPK1AO00322 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
UPK1AO00322 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.63□□□□□ -2.31
UPK1AO00322 MTND4P12-201ENST00000498999 1377 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 Y_RNA.124-201ENST00000363339 93 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 Y_RNA.151-201ENST00000363566 112 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 RNU6-137P-201ENST00000363680 108 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 Y_RNA.164-201ENST00000363709 102 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 Y_RNA.184-201ENST00000363884 108 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 Y_RNA.231-201ENST00000364358 102 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 RNU6-793P-201ENST00000384233 104 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 CALM2P3-201ENST00000400429 449 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 MIR942-201ENST00000401111 86 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 RPL30P16-201ENST00000419341 429 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 AC079354.2-201ENST00000453523 154 ntBASIC0.63□□□□□ -2.31
UPK1AO00322 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms