Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RPL31P58-201ENST00000469001 379 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 RPL7P42-201ENST00000481005 679 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 AC025465.3-201ENST00000510570 311 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 RNU6-107P-201ENST00000516643 102 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 AC025647.1-201ENST00000517879 253 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 AL121579.1-201ENST00000555129 305 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 MZT1P2-201ENST00000604387 248 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 AL353149.1-201ENST00000610667 244 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 AC010999.1-201ENST00000611856 324 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.44□□□□□ -2.18
PDLIM1O00151 AL359757.2-201ENST00000624309 274 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 MTND5P16-201ENST00000460269 1703 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNU6-222P-201ENST00000362438 107 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 Y_RNA.88-201ENST00000363029 99 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNY1P16-201ENST00000363063 111 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 U3.8-201ENST00000363675 217 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNU1-42P-201ENST00000364033 160 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNU6-331P-201ENST00000384724 107 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNA5SP213-201ENST00000391031 106 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNU6-482P-201ENST00000391068 107 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNA5SP323-201ENST00000391094 133 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 MIR190B-201ENST00000401119 79 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 AC015922.2-201ENST00000435593 184 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 AC069257.2-201ENST00000441819 155 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 MTND3P10-201ENST00000450967 341 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNU6-221P-201ENST00000459541 99 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNU6-1114P-201ENST00000516022 107 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.43□□□□□ -2.18
PDLIM1O00151 MIR4769-201ENST00000584126 77 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 AC005014.2-201ENST00000607795 599 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.43□□□□□ -2.18
PDLIM1O00151 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.43□□□□□ -2.18
PDLIM1O00151 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
PDLIM1O00151 AC099654.5-201ENST00000636479 350 ntBASIC1.43□□□□□ -2.18
PDLIM1O00151 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PDLIM1O00151 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.42□□□□□ -2.18
PDLIM1O00151 Y_RNA.184-201ENST00000363884 108 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 Y_RNA.279-201ENST00000364763 95 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 RNU6-338P-201ENST00000383888 105 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 RNU6-360P-201ENST00000390944 104 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 MIR1185-2-201ENST00000408687 86 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 MTCYBP10-201ENST00000424905 650 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 AC073910.1-201ENST00000445047 438 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.42□□□□□ -2.18
PDLIM1O00151 AC093303.1-201ENST00000514549 295 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 RNU6-237P-201ENST00000515985 71 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 RNA5SP481-201ENST00000516814 122 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 RNA5SP437-201ENST00000517249 129 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 AP003033.1-201ENST00000527244 415 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.42□□□□□ -2.18
PDLIM1O00151 AC093023.1-201ENST00000547375 507 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 MIR3124-201ENST00000582636 67 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.42□□□□□ -2.18
PDLIM1O00151 AL353997.5-201ENST00000618886 171 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 MTND5P35-201ENST00000557537 1720 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 ZNF72P-201ENST00000425869 1908 ntBASIC1.42□□□□□ -2.18
PDLIM1O00151 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.41□□□□□ -2.18
PDLIM1O00151 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PDLIM1O00151 RNU6-1266P-201ENST00000362794 105 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 Y_RNA.287-201ENST00000364853 94 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 SNORA72.2-201ENST00000365028 127 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 RNU6-281P-201ENST00000384212 103 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 MIR515-2-201ENST00000384883 83 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 MIR515-1-201ENST00000384884 83 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 SNORA17.3-201ENST00000391159 129 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 RNA5SP467-201ENST00000391274 118 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 SNORA75.4-201ENST00000391278 119 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 MIR1267-201ENST00000408723 78 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.41□□□□□ -2.18
PDLIM1O00151 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.41□□□□□ -2.18
PDLIM1O00151 Y_RNA.683-201ENST00000516508 93 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.41□□□□□ -2.18
PDLIM1O00151 AC090617.3-201ENST00000573670 475 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 AC005899.2-201ENST00000584353 90 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.41□□□□□ -2.18
PDLIM1O00151 AC006026.1-201ENST00000444025 1803 ntBASIC1.4□□□□□ -2.18
PDLIM1O00151 SNORA33-201ENST00000363664 130 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 RNA5SP99-201ENST00000364020 114 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 Y_RNA.364-201ENST00000365532 101 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 Y_RNA.404-201ENST00000383978 102 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 RNU1-139P-201ENST00000391307 165 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 AC016909.1-201ENST00000415916 166 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 AC092423.1-201ENST00000430165 186 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 FTH1P12-201ENST00000432137 551 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 NDUFB4P10-201ENST00000452541 359 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 RNU6-307P-201ENST00000516743 106 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.4□□□□□ -2.19
PDLIM1O00151 AK6P2-201ENST00000549020 471 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 MIR5701-3-201ENST00000578890 82 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 MIR5701-1-201ENST00000585138 82 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 MIR5701-2-201ENST00000615634 82 ntBASIC1.4□□□□□ -2.19
PDLIM1O00151 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms