Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-57P-201ENST00000411348 103 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AL158823.1-201ENST00000418441 478 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AC244636.1-201ENST00000421152 228 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AC245047.4-201ENST00000433189 144 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU1-131P-201ENST00000458943 161 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU7-57P-201ENST00000459540 60 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.708-201ENST00000516950 96 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-856P-201ENST00000516959 98 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AC125232.2-201ENST00000592457 143 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AC103810.8-201ENST00000607347 118 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 MIR6078-201ENST00000611069 100 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AL627230.6-201ENST00000611129 280 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AC025253.1-201ENST00000613623 543 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AC084781.2-201ENST00000615568 161 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU1-62P-201ENST00000362599 164 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.132-201ENST00000363421 102 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 SNORA72.1-201ENST00000363485 129 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-112P-201ENST00000363599 104 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.166-201ENST00000363730 102 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-99P-201ENST00000364721 107 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.287-201ENST00000364853 94 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-203P-201ENST00000384038 104 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-281P-201ENST00000384212 103 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.557-201ENST00000384680 107 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-541P-201ENST00000384709 110 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 SNORA40.19-201ENST00000390846 128 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-1001P-201ENST00000411265 100 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AC098614.3-201ENST00000438957 440 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AC245102.2-201ENST00000448956 180 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AC007395.1-201ENST00000451333 677 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU7-87P-201ENST00000459343 62 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 PRDX4P1-201ENST00000507189 574 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 MRPS17P9-201ENST00000511924 393 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AC067942.3-201ENST00000512025 362 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AC011406.1-201ENST00000512440 370 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU7-175P-201ENST00000515915 61 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNA5SP437-201ENST00000517249 129 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AC091144.1-201ENST00000519573 138 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AC026470.2-201ENST00000561492 181 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 AC005668.1-201ENST00000571142 476 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 CYP2C61P-201ENST00000604072 290 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 MIR8070-201ENST00000616510 88 ntBASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-1188P-201ENST00000363795 107 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 SNORA4.2-201ENST00000365313 147 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-890P-201ENST00000384121 107 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 SNORD116-29-201ENST00000384516 83 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-417P-201ENST00000384712 107 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 RNA5SP467-201ENST00000391274 118 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 MIR190B-201ENST00000401119 79 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-955P-201ENST00000410497 104 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 RN7SKP51-201ENST00000410781 304 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 MRPS18CP6-201ENST00000423587 223 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 HMGN2P34-201ENST00000437647 269 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AC005002.2-201ENST00000438228 269 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AL606517.2-201ENST00000442855 241 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AL357134.1-201ENST00000445848 426 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 ATP5J2P3-201ENST00000451550 258 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 RNU1-123P-201ENST00000458950 160 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AC005908.1-201ENST00000468701 347 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 RPL31P58-201ENST00000469001 379 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AC105758.1-201ENST00000506038 399 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AP002001.1-203ENST00000534002 267 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AC093027.1-201ENST00000546698 429 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 MIR4753-201ENST00000585119 83 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AL109918.3-201ENST00000603072 338 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 SNRPGP20-201ENST00000604477 205 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 MIR7974-201ENST00000615835 79 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AC008873.1-201ENST00000625051 138 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 AC095038.3-201ENST00000634439 195 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 MIR338-201ENST00000636369 67 ntBASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV40A0A0B4J280 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.58-201ENST00000362807 102 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.142-201ENST00000363491 102 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.154-201ENST00000363624 102 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-392P-201ENST00000364926 101 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 RNY3P1-201ENST00000365085 102 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 RNY3-201ENST00000365484 102 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.358-201ENST00000365491 99 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-318P-201ENST00000384283 103 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.490-201ENST00000384413 102 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 MIR586-201ENST00000385035 97 ntBASIC1.09□□□□□ -2.23
TRAV40A0A0B4J280 MIR300-201ENST00000401138 83 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms