Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MIR329-1-201ENST00000385028 80 ntBASIC2.04□□□□□ -2.08
YIPF1Q9Y548 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.04□□□□□ -2.08
YIPF1Q9Y548 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.04□□□□□ -2.08
YIPF1Q9Y548 PMCHL1-202ENST00000423102 261 ntBASIC2.04□□□□□ -2.08
YIPF1Q9Y548 MTND1P14-201ENST00000427400 950 ntBASIC2.04□□□□□ -2.08
YIPF1Q9Y548 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
YIPF1Q9Y548 Y_RNA.631-201ENST00000459607 101 ntBASIC2.04□□□□□ -2.08
YIPF1Q9Y548 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.04□□□□□ -2.08
YIPF1Q9Y548 RNU6-344P-201ENST00000516635 111 ntBASIC2.04□□□□□ -2.08
YIPF1Q9Y548 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.04□□□□□ -2.08
YIPF1Q9Y548 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.04□□□□□ -2.08
YIPF1Q9Y548 U2.1-201ENST00000618978 145 ntBASIC2.04□□□□□ -2.08
YIPF1Q9Y548 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
YIPF1Q9Y548 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
YIPF1Q9Y548 AC134503.1-201ENST00000633048 54 ntBASIC2.04□□□□□ -2.08
YIPF1Q9Y548 AC005336.3-201ENST00000623833 2679 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 Y_RNA.216-201ENST00000364205 93 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 RNU6-1305P-201ENST00000364353 104 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 RNU4-76P-201ENST00000364509 141 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 SNORD87-201ENST00000364849 89 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 RNU1-115P-201ENST00000365329 160 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 RNU6-708P-201ENST00000384217 107 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 RNU6-793P-201ENST00000384233 104 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 RNU6-318P-201ENST00000384283 103 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 SNORA67.2-201ENST00000384300 149 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 SNORD23.1-201ENST00000408212 104 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 RNA5SP504-201ENST00000410676 117 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 SRIP3-201ENST00000413200 219 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AL160004.2-201ENST00000432935 350 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 IPO7P1-201ENST00000442031 636 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AC006600.1-201ENST00000572529 153 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AL031274.2-201ENST00000599419 203 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 SNORD58B-201ENST00000607313 66 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 MIR4272-201ENST00000635924 64 ntBASIC2.03□□□□□ -2.08
YIPF1Q9Y548 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.03□□□□□ -2.08
YIPF1Q9Y548 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
YIPF1Q9Y548 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
YIPF1Q9Y548 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.03□□□□□ -2.08
YIPF1Q9Y548 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
YIPF1Q9Y548 MTND5P35-201ENST00000557537 1720 ntBASIC2.03□□□□□ -2.09
YIPF1Q9Y548 RNU6-1301P-201ENST00000362724 104 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 RNU5F-3P-201ENST00000363767 117 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.332-201ENST00000365271 113 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.415-201ENST00000384012 112 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 RNU6-418P-201ENST00000384035 107 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 RNU6-1145P-201ENST00000384246 107 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 AL355497.1-201ENST00000406262 551 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 MIR1283-1-201ENST00000408494 87 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.02□□□□□ -2.09
YIPF1Q9Y548 MTND4P19-201ENST00000446659 478 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.02□□□□□ -2.09
YIPF1Q9Y548 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.02□□□□□ -2.09
YIPF1Q9Y548 AC016925.1-201ENST00000458303 298 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 RPL23AP63-201ENST00000498752 471 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 RN7SKP295-201ENST00000517264 153 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 AC020661.2-201ENST00000560114 134 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.02□□□□□ -2.09
YIPF1Q9Y548 AC026271.5-201ENST00000577873 130 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 MIR3171-201ENST00000584270 74 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 SNORD11B-201ENST00000607707 90 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 AL606534.2-204ENST00000635008 178 ntBASIC2.02□□□□□ -2.09
YIPF1Q9Y548 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
YIPF1Q9Y548 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.28-201ENST00000362554 111 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.39-201ENST00000362620 98 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 MIR300-201ENST00000401138 83 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 MIR548P-201ENST00000408336 84 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 RNU2-20P-201ENST00000410425 191 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 MCFD2P1-201ENST00000417812 300 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 AC123900.1-201ENST00000420390 96 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 AL603825.1-201ENST00000438481 80 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.01□□□□□ -2.09
YIPF1Q9Y548 RPL23AP7-203ENST00000449021 469 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.01□□□□□ -2.09
YIPF1Q9Y548 Y_RNA.683-201ENST00000516508 93 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 MIR2355-201ENST00000517199 87 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 AK6P2-201ENST00000549020 471 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 MIR5188-201ENST00000583467 113 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 MIR4753-201ENST00000585119 83 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 VN1R91P-201ENST00000594377 169 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 AL357075.2-201ENST00000614906 189 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
YIPF1Q9Y548 AC068205.3-201ENST00000636385 468 ntBASIC2.01□□□□□ -2.09
YIPF1Q9Y548 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
YIPF1Q9Y548 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
YIPF1Q9Y548 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
YIPF1Q9Y548 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2□□□□□ -2.09
YIPF1Q9Y548 AC091812.1-201ENST00000432235 1948 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
YIPF1Q9Y548 MIR340-201ENST00000362125 95 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms