Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.67□□□□□ -2.3
RHBDD3Q9Y3P4 AL157687.1-201ENST00000554853 619 ntBASIC0.67□□□□□ -2.3
RHBDD3Q9Y3P4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.67□□□□□ -2.3
RHBDD3Q9Y3P4 Z94722.1-201ENST00000604328 474 ntBASIC0.67□□□□□ -2.3
RHBDD3Q9Y3P4 AC006435.5-201ENST00000624486 112 ntBASIC0.67□□□□□ -2.3
RHBDD3Q9Y3P4 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
RHBDD3Q9Y3P4 RNU5F-3P-201ENST00000363767 117 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 RNU6-214P-201ENST00000384130 107 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 SNORA12.1-201ENST00000390873 148 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 FABP5P4-201ENST00000437203 171 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 SNORA70.12-201ENST00000516084 153 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 RNA5SP454-201ENST00000517231 127 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 AC104576.1-201ENST00000524225 88 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 MTND1P15-201ENST00000579262 949 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 CPDP1-201ENST00000579660 283 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 AL136370.1-201ENST00000608166 691 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 CASC19-280ENST00000642102 1351 ntBASIC0.66□□□□□ -2.3
RHBDD3Q9Y3P4 AC018630.2-201ENST00000534866 2403 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AP000568.1-201ENST00000282964 442 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-137P-201ENST00000363680 108 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-969P-201ENST00000383900 105 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 RNA5SP504-201ENST00000410676 117 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AL358934.1-201ENST00000432346 324 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 RNU7-90P-201ENST00000459216 62 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 RPL23AP75-201ENST00000491601 451 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 RNA5SP255-201ENST00000516370 107 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 RNU7-28P-201ENST00000516759 62 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AC060788.1-201ENST00000521318 469 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AP001372.4-201ENST00000524889 472 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AC100830.2-201ENST00000581636 240 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AC010620.1-201ENST00000601088 1102 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 AL354950.2-201ENST00000617939 290 ntBASIC0.65□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-1103P-201ENST00000384150 107 ntBASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-325P-201ENST00000411132 105 ntBASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AL663109.1-201ENST00000411498 844 ntBASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AC022493.2-201ENST00000506122 481 ntBASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-947P-201ENST00000516264 106 ntBASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AC092747.3-201ENST00000603769 301 ntBASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AL357078.3-201ENST00000607528 618 ntBASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 AC068137.4-201ENST00000638485 296 ntBASIC0.64□□□□□ -2.31
RHBDD3Q9Y3P4 SNORD115-32-201ENST00000364079 82 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 RNU1-93P-201ENST00000364704 169 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 MIR521-1-201ENST00000384902 87 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 AC073464.1-201ENST00000429823 534 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 STAG3L5P-204ENST00000443759 179 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 RNU7-21P-201ENST00000459430 62 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 AC091885.1-201ENST00000506658 268 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 AC091133.4-201ENST00000511142 308 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 MIR4778-201ENST00000577635 80 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 MIR4781-201ENST00000585250 76 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 AC093424.1-201ENST00000604999 338 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
RHBDD3Q9Y3P4 Y_RNA.164-201ENST00000363709 102 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-424P-201ENST00000384367 105 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 RNY3P9-201ENST00000384727 106 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 Y_RNA.654-201ENST00000497848 106 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 SNORA19.2-201ENST00000516013 114 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 RN7SKP287-201ENST00000516546 266 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 MIR5692C1-201ENST00000585309 91 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 AC080078.2-201ENST00000603766 501 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 AC017083.3-201ENST00000609955 700 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 AC108706.1-201ENST00000611053 297 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.62□□□□□ -2.31
RHBDD3Q9Y3P4 RNA5SP361-201ENST00000362686 118 ntBASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-1158P-201ENST00000391167 107 ntBASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 LINC01399-202ENST00000458450 244 ntBASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 RPS26P48-201ENST00000491713 339 ntBASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-917P-201ENST00000516294 104 ntBASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 AC011604.1-201ENST00000545978 196 ntBASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 AL353765.1-201ENST00000605514 183 ntBASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 AC012557.2-201ENST00000605919 418 ntBASIC0.61□□□□□ -2.31
RHBDD3Q9Y3P4 RNU4-9P-201ENST00000364951 139 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 RNU6-163P-201ENST00000384396 106 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 SNORD116-13-201ENST00000384408 92 ntBASIC0.6□□□□□ -2.31
RHBDD3Q9Y3P4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms