Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC134026.1-201ENST00000623249 2239 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 RNU6-407P-201ENST00000365280 104 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 Y_RNA.338-201ENST00000365320 114 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 RNU6-813P-201ENST00000384691 107 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 RNU6-588P-201ENST00000410281 105 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 BPY2DP-201ENST00000422208 265 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 AC068657.1-201ENST00000520807 306 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 AC100767.1-201ENST00000528178 123 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 LINC00933-203ENST00000559812 219 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 ZNF192P1-203ENST00000565888 810 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 AC090617.7-201ENST00000623952 126 ntBASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.11□□□□□ -1.75
COL17A1Q9UMD9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 snoU2_19.4-201ENST00000364329 80 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 RNU6-19P-201ENST00000384718 107 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 MIR1183-201ENST00000408856 89 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 Y_RNA.595-201ENST00000410403 105 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 TOMM22P1-201ENST00000418578 312 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 AC112220.1-201ENST00000434628 355 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 HMGB3P8-201ENST00000449709 577 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 RNU6-966P-201ENST00000516479 104 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 AC021269.2-201ENST00000532318 330 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 AP000867.2-201ENST00000532468 320 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 AC060766.3-201ENST00000591442 263 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 MIR6844-201ENST00000637122 62 ntBASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL17A1Q9UMD9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 SNORD114-19-201ENST00000363072 75 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 Y_RNA.230-201ENST00000364348 109 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 Y_RNA.251-201ENST00000364551 99 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 RNU6-140P-201ENST00000384566 108 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 Y_RNA.637-201ENST00000459424 114 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 AC010265.1-201ENST00000513509 211 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 RN7SKP164-201ENST00000516138 266 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 RN7SKP12-201ENST00000516275 143 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 RNU6-521P-201ENST00000516663 105 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 AC109810.1-201ENST00000534066 224 ntBASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.09□□□□□ -1.75
COL17A1Q9UMD9 AC093831.2-201ENST00000624393 3427 ntBASIC4.09□□□□□ -1.76
COL17A1Q9UMD9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 RNU6-105P-201ENST00000363909 104 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 RNU6-142P-201ENST00000384019 107 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 RNU6-106P-201ENST00000384405 107 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 SNORD72-201ENST00000390994 80 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 RNA5SP213-201ENST00000391031 106 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 RNA5SP225-201ENST00000410874 135 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AC004386.2-201ENST00000441858 148 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AL353705.4-201ENST00000449661 238 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AC133485.4-201ENST00000561835 220 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AC138907.4-201ENST00000570107 226 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AC005176.2-201ENST00000596933 147 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 RMST_6.1-201ENST00000611980 203 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 SCARNA4-201ENST00000629045 128 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AL133412.1-201ENST00000380194 2992 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 AC022336.2-201ENST00000568966 2538 ntBASIC4.08□□□□□ -1.76
COL17A1Q9UMD9 ADAM3A-203ENST00000461344 2157 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RNU6-50P-201ENST00000362356 103 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RNU6-103P-201ENST00000363686 107 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 Y_RNA.221-201ENST00000364248 96 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RNU6-768P-201ENST00000384683 107 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 MIR548A1-201ENST00000385041 97 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RNU6-1197P-201ENST00000391183 107 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 CYCSP49-201ENST00000420810 319 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 AL714022.1-201ENST00000439897 151 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 AC009296.1-201ENST00000443146 155 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 HMGN2P32-201ENST00000444648 269 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RPS27P29-201ENST00000463110 252 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RN7SL633P-201ENST00000488974 297 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 SRIP1-201ENST00000489235 288 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RPL30P5-201ENST00000494923 336 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 AC005921.1-201ENST00000510589 286 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RNU5F-2P-201ENST00000516066 82 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RNU6-1061P-201ENST00000516530 99 ntBASIC4.07□□□□□ -1.76
COL17A1Q9UMD9 RNU6-1282P-201ENST00000516735 96 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms