Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 FRG2DP-202ENST00000566967 323 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 MIR4498-201ENST00000577599 66 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 MIR4424-201ENST00000585257 86 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.58□□□□□ -2.32
VAPAQ9P0L0 AC092747.3-201ENST00000603769 301 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 AL357312.1-201ENST00000603879 298 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 SNORA28-201ENST00000606769 126 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 AL360219.1-201ENST00000610230 366 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 AC104465.1-201ENST00000611365 139 ntBASIC0.58□□□□□ -2.32
VAPAQ9P0L0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
VAPAQ9P0L0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.57□□□□□ -2.32
VAPAQ9P0L0 MIR1185-2-201ENST00000408687 86 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 RNU6-321P-201ENST00000410912 106 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.57□□□□□ -2.32
VAPAQ9P0L0 CALM2P4-201ENST00000430810 426 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 RPEP5-201ENST00000441137 268 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 MTCO2P18-201ENST00000457151 658 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 RNU7-21P-201ENST00000459430 62 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 MTCO3P38-201ENST00000468910 766 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 AL157687.1-201ENST00000554853 619 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 AL121757.2-201ENST00000611223 313 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 MIR8076-201ENST00000611401 83 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 AC005609.4-201ENST00000625071 447 ntBASIC0.57□□□□□ -2.32
VAPAQ9P0L0 SNORA2.2-201ENST00000365473 135 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
VAPAQ9P0L0 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
VAPAQ9P0L0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AC093850.1-201ENST00000454121 251 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 RNU7-90P-201ENST00000459216 62 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AC092436.3-201ENST00000511788 257 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.56□□□□□ -2.32
VAPAQ9P0L0 RNA5SP54-201ENST00000516951 92 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AP002001.1-203ENST00000534002 267 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AC040904.1-201ENST00000590850 223 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AC087683.1-201ENST00000591187 441 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 AC103705.1-201ENST00000619013 241 ntBASIC0.56□□□□□ -2.32
VAPAQ9P0L0 Y_RNA.265-201ENST00000364677 108 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 Y_RNA.381-201ENST00000365666 102 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 RNU6-245P-201ENST00000384020 107 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 RNU6-784P-201ENST00000384330 106 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 RNU5A-2P-201ENST00000384337 116 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 RNU6-933P-201ENST00000384424 107 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 MIR508-201ENST00000384857 115 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 SNORA75.2-201ENST00000391138 150 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 SNORA75.3-201ENST00000391231 150 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 U8.16-201ENST00000391279 133 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.55□□□□□ -2.32
VAPAQ9P0L0 MRPS10P2-201ENST00000431226 381 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 AL031667.1-201ENST00000440222 725 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 AL359672.1-201ENST00000442302 409 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.55□□□□□ -2.32
VAPAQ9P0L0 AC091133.4-201ENST00000511142 308 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 RNU6-237P-201ENST00000515985 71 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 SNORA25.14-201ENST00000516481 132 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 AC027419.1-201ENST00000522976 328 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.55□□□□□ -2.32
VAPAQ9P0L0 MIR4438-201ENST00000585271 93 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 MIR5692C1-201ENST00000585309 91 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 AC091931.1-201ENST00000623488 728 ntBASIC0.55□□□□□ -2.32
VAPAQ9P0L0 U3.8-201ENST00000363675 217 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 RNU6-424P-201ENST00000384367 105 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 SNORD116-13-201ENST00000384408 92 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 RNY3P9-201ENST00000384727 106 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
VAPAQ9P0L0 SNORD37.1-201ENST00000390968 65 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 AL663109.1-201ENST00000411498 844 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.54□□□□□ -2.32
VAPAQ9P0L0 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.54□□□□□ -2.32
VAPAQ9P0L0 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 AC022493.2-201ENST00000506122 481 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 MTCO2P4-201ENST00000517968 247 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.54□□□□□ -2.32
VAPAQ9P0L0 MIR4781-201ENST00000585250 76 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 AL353765.1-201ENST00000605514 183 ntBASIC0.54□□□□□ -2.32
VAPAQ9P0L0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
VAPAQ9P0L0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
VAPAQ9P0L0 RNU6-727P-201ENST00000363592 107 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 RNU6-82P-201ENST00000363970 107 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 RNU1-93P-201ENST00000364704 169 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 RNU5A-6P-201ENST00000384136 116 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 RNU6-1158P-201ENST00000391167 107 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AL035398.1-201ENST00000430869 322 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AC104332.1-201ENST00000440471 797 ntBASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.53□□□□□ -2.32
VAPAQ9P0L0 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.53□□□□□ -2.32
VAPAQ9P0L0 MTCO1P29-201ENST00000496868 288 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms