Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 Y_RNA.151-201ENST00000363566 112 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 RNU4-40P-201ENST00000364351 143 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 RNU6-968P-201ENST00000384076 107 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 MIR586-201ENST00000385035 97 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 MIR513A1-201ENST00000385138 129 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 NDUFA5P4-201ENST00000436704 385 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 MTND1P11-201ENST00000456661 876 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 RPS26P45-201ENST00000471748 340 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 MTCO1P29-201ENST00000496868 288 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AC016957.1-201ENST00000534895 309 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 SNRPGP20-201ENST00000604477 205 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AL133215.3-201ENST00000609801 448 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 MIR8076-201ENST00000611401 83 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AC009033.1-201ENST00000624279 431 ntBASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 AC027514.1-201ENST00000588561 1603 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.3-201ENST00000362331 103 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 RNU6-95P-201ENST00000384697 107 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 MTCO3P18-201ENST00000440206 761 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC074290.1-201ENST00000448883 135 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 RNU7-34P-201ENST00000459394 64 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 HMGN1P12-201ENST00000499125 195 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC024995.1-201ENST00000523014 93 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 MTND1P35-201ENST00000526739 508 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 MIR3672-201ENST00000584290 82 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC097065.2-201ENST00000608159 533 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC040896.1-201ENST00000613819 479 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC006001.4-201ENST00000622243 395 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 AC099654.5-201ENST00000636479 350 ntBASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
KLHL28Q9NXS3 SNORD50.1-201ENST00000362987 71 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 RNU6-784P-201ENST00000384330 106 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 RNU6-417P-201ENST00000384712 107 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 SNRPEP10-201ENST00000420249 274 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 TPRKBP2-201ENST00000565969 475 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 MZT1P2-201ENST00000604387 248 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 AC012557.2-201ENST00000605919 418 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 MIR6504-201ENST00000613520 61 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 AL138726.1-201ENST00000614873 333 ntBASIC1.11□□□□□ -2.23
KLHL28Q9NXS3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 RNU6-933P-201ENST00000384424 107 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.516-201ENST00000384541 124 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 RNU6-1148P-201ENST00000410992 104 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 MRPL35P3-201ENST00000421557 364 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 MTND3P21-201ENST00000433774 331 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 PGBD4P5-201ENST00000445958 426 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 AC079354.2-201ENST00000453523 154 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 RNU7-57P-201ENST00000459540 60 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 RPL23AP75-201ENST00000491601 451 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 RNU6-720P-201ENST00000516363 108 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 EIF1P4-201ENST00000572664 335 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 MIR3942-201ENST00000585264 109 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 AC090617.10-201ENST00000624308 134 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 SCARNA4-201ENST00000629045 128 ntBASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KLHL28Q9NXS3 RNU6-623P-201ENST00000363143 105 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.402-201ENST00000383972 102 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 RNU6-128P-201ENST00000383976 107 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 SNORA67.2-201ENST00000384300 149 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 SNORD116-4-201ENST00000384733 96 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 MIR181A1-201ENST00000385026 110 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 RNA5SP467-201ENST00000391274 118 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 RPL21P1-201ENST00000399532 476 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 MIR1253-201ENST00000408273 105 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms