Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC068657.1-201ENST00000520807 306 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 CR383656.8-201ENST00000549046 145 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 AL391813.1-201ENST00000603098 260 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 FTX_3.1-201ENST00000610451 147 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 AL359198.2-201ENST00000611836 194 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 AL078604.3-201ENST00000615580 211 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 AC013791.1-201ENST00000616619 62 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ATG3Q9NT62 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG3Q9NT62 GABRG2-229ENST00000641017 3628 ntBASIC3.85□□□□□ -1.79
ATG3Q9NT62 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATG3Q9NT62 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.84□□□□□ -1.79
ATG3Q9NT62 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ATG3Q9NT62 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ATG3Q9NT62 Y_RNA.24-201ENST00000362508 103 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 Y_RNA.337-201ENST00000365312 102 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AC006461.1-201ENST00000412637 326 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 RPS26P42-201ENST00000413485 326 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AC099548.1-201ENST00000421443 426 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AC012306.1-201ENST00000423267 114 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 RPS12P18-201ENST00000442381 270 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AC125238.1-201ENST00000448842 249 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 MTATP6P7-201ENST00000453315 681 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.84□□□□□ -1.79
ATG3Q9NT62 AL031183.1-201ENST00000457667 207 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AP002884.2-201ENST00000471647 395 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.84□□□□□ -1.79
ATG3Q9NT62 RAC1P5-201ENST00000512182 576 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AC136628.3-201ENST00000521868 290 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 MIR4679-2-201ENST00000578358 77 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.84□□□□□ -1.79
ATG3Q9NT62 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.84□□□□□ -1.79
ATG3Q9NT62 AC073308.1-201ENST00000623696 305 ntBASIC3.84□□□□□ -1.79
ATG3Q9NT62 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.84□□□□□ -1.79
ATG3Q9NT62 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
ATG3Q9NT62 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
ATG3Q9NT62 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ATG3Q9NT62 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATG3Q9NT62 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG3Q9NT62 RNU4-82P-201ENST00000362443 140 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 RNU6-1310P-201ENST00000384153 107 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 RNU6-476P-201ENST00000384726 107 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 RNU6-376P-201ENST00000384731 106 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 RNU1-101P-201ENST00000391171 127 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG3Q9NT62 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG3Q9NT62 RN7SL20P-201ENST00000488827 297 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG3Q9NT62 RNU1-143P-201ENST00000516296 146 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 SNORA31.16-201ENST00000516773 139 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 Y_RNA.709-201ENST00000516952 92 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG3Q9NT62 U1.23-201ENST00000610293 146 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 RNU1-68P-201ENST00000615382 146 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 MIR6134-201ENST00000617606 109 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 U1.39-201ENST00000621562 146 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 SNORA50A-202ENST00000629536 136 ntBASIC3.83□□□□□ -1.8
ATG3Q9NT62 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG3Q9NT62 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG3Q9NT62 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATG3Q9NT62 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG3Q9NT62 RNU6-407P-201ENST00000365280 104 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 SNORA26.3-201ENST00000391119 136 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 AC078809.1-201ENST00000427601 140 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 AC244670.1-201ENST00000436879 112 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 AC007215.1-201ENST00000464893 276 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 RNU6-561P-201ENST00000516222 102 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 RNU6-1007P-201ENST00000516586 107 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 AC021231.3-201ENST00000558497 370 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 MIR3529-201ENST00000637713 78 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG3Q9NT62 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG3Q9NT62 AC010329.5-201ENST00000623497 2174 ntBASIC3.82□□□□□ -1.8
ATG3Q9NT62 AC096644.4-201ENST00000563417 2912 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.81□□□□□ -1.8
ATG3Q9NT62 AC010680.1-201ENST00000590024 3590 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 RNU6-324P-201ENST00000363957 106 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 RNU6-755P-201ENST00000364400 103 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 RNU6-1144P-201ENST00000384247 104 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 RNU6-198P-201ENST00000384258 104 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 RNU6-851P-201ENST00000384565 107 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 SNORA8.3-201ENST00000384679 139 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 SNORD37.2-201ENST00000391075 66 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG3Q9NT62 AC009969.1-201ENST00000438726 172 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 AC245047.8-201ENST00000456455 284 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.81□□□□□ -1.8
ATG3Q9NT62 RNA5SP76-201ENST00000516277 87 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 AC005520.5-201ENST00000613926 164 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 AC012640.5-201ENST00000623897 319 ntBASIC3.81□□□□□ -1.8
ATG3Q9NT62 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ATG3Q9NT62 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATG3Q9NT62 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.81□□□□□ -1.8
ATG3Q9NT62 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG3Q9NT62 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.8□□□□□ -1.8
ATG3Q9NT62 AC092268.1-201ENST00000342691 405 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 MIR148B-201ENST00000362252 99 ntBASIC3.8□□□□□ -1.8
ATG3Q9NT62 Y_RNA.293-201ENST00000364908 93 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms