Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
HMG20AQ9NP66 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMG20AQ9NP66 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMG20AQ9NP66 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.08□□□□□ -2.24
HMG20AQ9NP66 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMG20AQ9NP66 SNORD115-8-201ENST00000363856 82 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 SNORD115-32-201ENST00000364079 82 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 SNORD115-38-201ENST00000365037 82 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.405-201ENST00000383979 100 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.451-201ENST00000384200 100 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 RNU6-17P-201ENST00000384245 107 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 RNU6-18P-201ENST00000384527 107 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.524-201ENST00000384564 100 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.561-201ENST00000384694 100 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 RNU6-360P-201ENST00000390944 104 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 RNA5SP109-201ENST00000391010 116 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 RNA5SP213-201ENST00000391031 106 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
HMG20AQ9NP66 AC243428.1-201ENST00000421099 264 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 AC005002.2-201ENST00000438228 269 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 JTBP1-201ENST00000441314 247 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 MTND1P17-201ENST00000448961 204 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.08□□□□□ -2.24
HMG20AQ9NP66 AC114982.1-201ENST00000469402 321 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 AC091179.3-201ENST00000474761 144 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 RPL36AP21-201ENST00000490372 323 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 AC103851.1-201ENST00000506833 274 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 MIR4742-201ENST00000581069 85 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 AL512598.1-201ENST00000610158 273 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 snoZ196.1-201ENST00000625269 89 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 U6.108-201ENST00000637764 58 ntBASIC1.08□□□□□ -2.24
HMG20AQ9NP66 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
HMG20AQ9NP66 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.08□□□□□ -2.24
HMG20AQ9NP66 MIR302D-201ENST00000362275 68 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 RNU6-222P-201ENST00000362438 107 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.86-201ENST00000363020 111 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 SNORD1A-201ENST00000364968 72 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 MIR153-2-201ENST00000385225 87 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 RNU6-159P-201ENST00000391080 106 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 SNORA17.3-201ENST00000391159 129 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.07□□□□□ -2.24
HMG20AQ9NP66 snoU13.23-201ENST00000458863 104 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AP000870.1-201ENST00000472927 406 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AC099513.1-201ENST00000490423 301 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AL163195.1-201ENST00000496941 348 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.682-201ENST00000516457 100 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 RNA5SP54-201ENST00000516951 92 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.07□□□□□ -2.24
HMG20AQ9NP66 CBX3P8-201ENST00000532412 525 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 FRG2DP-202ENST00000566967 323 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 MIR4273-201ENST00000582824 84 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 MIR3660-201ENST00000584845 100 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AC104984.5-201ENST00000586878 94 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AP003465.2-201ENST00000602571 373 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 MZT1P2-201ENST00000604387 248 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 SNORD11B-201ENST00000607707 90 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 U4.5-201ENST00000617137 123 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
HMG20AQ9NP66 ICE2P2-201ENST00000483823 2787 ntBASIC1.07□□□□□ -2.24
HMG20AQ9NP66 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.06□□□□□ -2.24
HMG20AQ9NP66 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.157-201ENST00000363638 102 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 RNU6-541P-201ENST00000384709 110 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.573-201ENST00000384763 105 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 MIR10B-201ENST00000385011 110 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 SNORA40.6-201ENST00000391153 128 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 MIR1253-201ENST00000408273 105 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 MIR320B2-201ENST00000408479 138 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AL161935.2-201ENST00000414627 60 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AC009161.1-201ENST00000417306 376 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 MTND4LP16-201ENST00000440828 295 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 RPS29P29-201ENST00000456396 171 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 RN7SKP210-201ENST00000459176 261 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 RNU6-221P-201ENST00000459541 99 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 RNA5SP445-201ENST00000515889 115 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AC019176.1-201ENST00000518519 225 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.06□□□□□ -2.24
HMG20AQ9NP66 DNAJC19P9-201ENST00000555084 351 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 MIR4790-201ENST00000577799 79 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 MIR4421-201ENST00000578133 69 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AL355802.3-201ENST00000607571 545 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AC084782.3-201ENST00000612282 578 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AC007014.2-201ENST00000615581 479 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 AC073869.6-201ENST00000640656 341 ntBASIC1.06□□□□□ -2.24
HMG20AQ9NP66 Y_RNA.67-201ENST00000362870 100 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 RNU6-595P-201ENST00000363944 107 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 RNU6-245P-201ENST00000384020 107 ntBASIC1.05□□□□□ -2.24
HMG20AQ9NP66 RNU1-78P-201ENST00000391248 165 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms