Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC090517.2-201ENST00000614966 680 ntBASIC2.02□□□□□ -2.09
CHMP4AQ9BY43 MIR3688-2-201ENST00000636963 87 ntBASIC2.02□□□□□ -2.09
CHMP4AQ9BY43 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CHMP4AQ9BY43 MIR513A1-201ENST00000385138 129 ntBASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 SNORA67.6-201ENST00000391093 99 ntBASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 MTND4LP16-201ENST00000440828 295 ntBASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 PGBD4P5-201ENST00000445958 426 ntBASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 AP003465.2-201ENST00000602571 373 ntBASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 uc_338.5-201ENST00000611839 155 ntBASIC2.01□□□□□ -2.09
CHMP4AQ9BY43 Y_RNA.157-201ENST00000363638 102 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 RNA5SP99-201ENST00000364020 114 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 Y_RNA.490-201ENST00000384413 102 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 RNU6-831P-201ENST00000384548 107 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 RNU6-417P-201ENST00000384712 107 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 RNA5SP118-201ENST00000410385 109 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 RN7SKP200-201ENST00000410564 320 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2□□□□□ -2.09
CHMP4AQ9BY43 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2□□□□□ -2.09
CHMP4AQ9BY43 RNA5SP458-201ENST00000516188 119 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 RNU6-864P-201ENST00000516256 108 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 RNU1-117P-201ENST00000517041 158 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2□□□□□ -2.09
CHMP4AQ9BY43 AL162424.1-201ENST00000602325 221 ntBASIC2□□□□□ -2.09
CHMP4AQ9BY43 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2□□□□□ -2.09
CHMP4AQ9BY43 RNU6-60P-201ENST00000364792 103 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 RNU6-1013P-201ENST00000384180 107 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 RNU6-541P-201ENST00000384709 110 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 RNA5SP213-201ENST00000391031 106 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 RNU6-1148P-201ENST00000410992 104 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 AL445305.1-201ENST00000432577 575 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 FO393415.2-201ENST00000480085 343 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 RNU6-58P-201ENST00000517143 103 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 SNORA31.24-201ENST00000517232 57 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 AC004584.2-201ENST00000570407 410 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.99□□□□□ -2.09
CHMP4AQ9BY43 Y_RNA.287-201ENST00000364853 94 ntBASIC1.98□□□□□ -2.09
CHMP4AQ9BY43 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.98□□□□□ -2.09
CHMP4AQ9BY43 MTATP6P13-201ENST00000438531 667 ntBASIC1.98□□□□□ -2.09
CHMP4AQ9BY43 MTND1P34-201ENST00000438556 671 ntBASIC1.98□□□□□ -2.09
CHMP4AQ9BY43 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP4AQ9BY43 MIR4273-201ENST00000582824 84 ntBASIC1.98□□□□□ -2.09
CHMP4AQ9BY43 AL512598.1-201ENST00000610158 273 ntBASIC1.98□□□□□ -2.09
CHMP4AQ9BY43 AC006435.5-201ENST00000624486 112 ntBASIC1.98□□□□□ -2.09
CHMP4AQ9BY43 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 SNORA25.8-201ENST00000364831 128 ntBASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 MIR150-201ENST00000385048 84 ntBASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 SNORA25.14-201ENST00000516481 132 ntBASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 RNU6-1088P-201ENST00000516850 104 ntBASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 MIR3684-201ENST00000579779 74 ntBASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 MIR8065-201ENST00000620577 100 ntBASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 AC073869.6-201ENST00000640656 341 ntBASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP4AQ9BY43 Y_RNA.6-201ENST00000362350 114 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 RNU6-457P-201ENST00000363999 107 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 RNU6-596P-201ENST00000365395 98 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 RNU6-203P-201ENST00000384038 104 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 RPL37P10-201ENST00000412884 288 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 RN7SKP210-201ENST00000459176 261 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 AC019176.1-201ENST00000518519 225 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 AC134698.4-201ENST00000523451 826 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 AC095038.3-201ENST00000634439 195 ntBASIC1.96□□□□□ -2.1
CHMP4AQ9BY43 RPL30P16-201ENST00000419341 429 ntBASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 AL135790.2-201ENST00000437701 267 ntBASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 RPS29P25-201ENST00000481709 171 ntBASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 RNU4-49P-201ENST00000516080 140 ntBASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 RNU1-54P-201ENST00000517181 120 ntBASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 RNA5SP454-201ENST00000517231 127 ntBASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 MIR6128-201ENST00000615528 109 ntBASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.95□□□□□ -2.1
CHMP4AQ9BY43 SNORA70.7-201ENST00000384159 133 ntBASIC1.94□□□□□ -2.1
CHMP4AQ9BY43 RNU6-793P-201ENST00000384233 104 ntBASIC1.94□□□□□ -2.1
CHMP4AQ9BY43 RNU6-939P-201ENST00000384634 107 ntBASIC1.94□□□□□ -2.1
CHMP4AQ9BY43 MIR1185-2-201ENST00000408687 86 ntBASIC1.94□□□□□ -2.1
CHMP4AQ9BY43 RNU6-955P-201ENST00000410497 104 ntBASIC1.94□□□□□ -2.1
CHMP4AQ9BY43 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.94□□□□□ -2.1
CHMP4AQ9BY43 Y_RNA.675-201ENST00000516389 149 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms