Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 MIR1267-201ENST00000408723 78 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 FCF1P9-201ENST00000412546 282 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 HMGN2P34-201ENST00000437647 269 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 NDUFB4P10-201ENST00000452541 359 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 SNORD5.1-201ENST00000458800 75 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 snoU13.9-201ENST00000458927 103 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-221P-201ENST00000459541 99 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-329P-201ENST00000459618 107 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 RPL26P26-201ENST00000480251 434 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 RNU7-175P-201ENST00000515915 61 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 AP003033.1-201ENST00000527244 415 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 AL590705.4-201ENST00000532209 134 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 MIR4422-201ENST00000581938 83 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 MIR3124-201ENST00000582636 67 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 PRR13P7-201ENST00000605538 430 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 MIR6128-201ENST00000615528 109 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 AC007014.2-201ENST00000615581 479 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 AC009248.2-201ENST00000619826 254 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 MTND4P12-201ENST00000498999 1377 ntBASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
KLHDC3Q9BQ90 ZNF72P-201ENST00000425869 1908 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 Y_RNA.140-201ENST00000363474 103 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-595P-201ENST00000363944 107 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 SNORA67.5-201ENST00000391036 107 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 RNU6-482P-201ENST00000391068 107 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 MIR1253-201ENST00000408273 105 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 USMG5P1-201ENST00000425964 177 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 USP9YP30-201ENST00000430729 455 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 JTBP1-201ENST00000441314 247 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 RNU7-95P-201ENST00000459222 64 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 SNORA31.24-201ENST00000517232 57 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 AF235103.2-201ENST00000525753 346 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 AC068790.6-201ENST00000602558 258 ntBASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
KLHDC3Q9BQ90 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.86-201ENST00000363020 111 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 U3.8-201ENST00000363675 217 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 RNU6-1059P-201ENST00000363752 98 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 RNU6-593P-201ENST00000364716 112 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 AC016909.1-201ENST00000415916 166 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 BTF3P4-201ENST00000418852 495 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 RPL30P16-201ENST00000419341 429 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 MTND5P5-201ENST00000503764 376 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 AC025647.1-201ENST00000517879 253 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 AC024995.1-201ENST00000523014 93 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 BNIP3P10-201ENST00000605360 577 ntBASIC1.27□□□□□ -2.21
KLHDC3Q9BQ90 AC027514.1-201ENST00000588561 1603 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.67-201ENST00000362870 100 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.287-201ENST00000364853 94 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 RNU6-1240P-201ENST00000365155 104 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.405-201ENST00000383979 100 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.451-201ENST00000384200 100 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 RNU6-793P-201ENST00000384233 104 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 RNU6-842P-201ENST00000384269 107 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.524-201ENST00000384564 100 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.561-201ENST00000384694 100 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 RNU6-417P-201ENST00000384712 107 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 MIR548B-201ENST00000385247 97 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 MTND1P4-201ENST00000435196 415 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 AP000870.1-201ENST00000472927 406 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 AC093303.1-201ENST00000514549 295 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 RNU6-237P-201ENST00000515985 71 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.675-201ENST00000516389 149 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.682-201ENST00000516457 100 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 UBL5P4-201ENST00000562584 236 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 SNORA77B-201ENST00000578179 125 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 MIR4742-201ENST00000581069 85 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 AC060780.3-201ENST00000589464 80 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 AC018462.2-201ENST00000605375 395 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.26□□□□□ -2.21
KLHDC3Q9BQ90 Y_RNA.72-201ENST00000362894 103 ntBASIC1.25□□□□□ -2.21
KLHDC3Q9BQ90 SNORA33-201ENST00000363664 130 ntBASIC1.25□□□□□ -2.21
KLHDC3Q9BQ90 SNORD87-201ENST00000364849 89 ntBASIC1.25□□□□□ -2.21
KLHDC3Q9BQ90 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
KLHDC3Q9BQ90 RNU6-192P-201ENST00000391253 100 ntBASIC1.25□□□□□ -2.21
KLHDC3Q9BQ90 MTND3P8-201ENST00000412909 339 ntBASIC1.25□□□□□ -2.21
KLHDC3Q9BQ90 RPL30P13-201ENST00000418873 348 ntBASIC1.25□□□□□ -2.21
KLHDC3Q9BQ90 SDAD1P3-201ENST00000427380 333 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms