Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 OR2AQ1P-201ENST00000451972 200 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.2□□□□□ -2.22
FOXC2Q99958 RNU6-329P-201ENST00000459618 107 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 RPS26P55-201ENST00000471178 356 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 AC092991.1-201ENST00000477176 376 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 RPS23P5-201ENST00000495419 428 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 MTCO2P30-201ENST00000503662 364 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.2□□□□□ -2.22
FOXC2Q99958 RNU6-358P-201ENST00000516564 75 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 RNA5SP454-201ENST00000517231 127 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.2□□□□□ -2.22
FOXC2Q99958 MIR151B-201ENST00000584249 96 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 AC016727.2-201ENST00000603988 621 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.2□□□□□ -2.22
FOXC2Q99958 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 AC100810.6-201ENST00000638068 285 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
FOXC2Q99958 AC010615.1-201ENST00000594254 1764 ntBASIC1.2□□□□□ -2.22
FOXC2Q99958 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
FOXC2Q99958 AL161722.3-201ENST00000605789 2983 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
FOXC2Q99958 MIR302D-201ENST00000362275 68 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 SNORD115-8-201ENST00000363856 82 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 SNORD1A-201ENST00000364968 72 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 SNORD115-38-201ENST00000365037 82 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 SNORA67.2-201ENST00000384300 149 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 MIR521-1-201ENST00000384902 87 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 MIR517A-201ENST00000385001 87 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 MIR1304-201ENST00000408243 91 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 AC004866.1-201ENST00000411748 78 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.19□□□□□ -2.22
FOXC2Q99958 PCMTD1P1-201ENST00000455560 355 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 RPS29P23-201ENST00000458635 123 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.19□□□□□ -2.22
FOXC2Q99958 RNU6-566P-201ENST00000516790 107 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.19□□□□□ -2.22
FOXC2Q99958 FAM106DP-201ENST00000586416 501 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 AC146944.4-201ENST00000602697 718 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 AC069114.2-201ENST00000604699 304 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.19□□□□□ -2.22
FOXC2Q99958 AC092794.1-201ENST00000612734 582 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.19□□□□□ -2.22
FOXC2Q99958 AC083806.3-201ENST00000614016 455 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 MIR6788-201ENST00000618842 66 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 SCARNA4-201ENST00000629045 128 ntBASIC1.19□□□□□ -2.22
FOXC2Q99958 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.19□□□□□ -2.22
FOXC2Q99958 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
FOXC2Q99958 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
FOXC2Q99958 BX322639.1-202ENST00000423987 2213 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 RNU6-862P-201ENST00000362804 105 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 RNU6-1019P-201ENST00000364424 107 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 MIR520E-201ENST00000384867 87 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 RNA5SP494-201ENST00000410653 129 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 RN7SKP51-201ENST00000410781 304 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 RPL30P13-201ENST00000418873 348 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 AC245047.4-201ENST00000433189 144 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 SNRPGP13-201ENST00000442212 177 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 AL353572.1-201ENST00000442490 417 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 NFU1P2-201ENST00000448700 469 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 ATP5J2P3-201ENST00000451550 258 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 AC010531.2-201ENST00000465012 153 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 AC023790.1-201ENST00000482174 347 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 RNU4-49P-201ENST00000516080 140 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 Y_RNA.675-201ENST00000516389 149 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 AP003033.1-201ENST00000527244 415 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
FOXC2Q99958 AC090517.1-201ENST00000569307 266 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 SNORA59B-202ENST00000578183 701 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 AC060780.3-201ENST00000589464 80 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 AC124303.1-201ENST00000605703 360 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 AC019193.3-201ENST00000609144 554 ntBASIC1.18□□□□□ -2.22
FOXC2Q99958 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.18□□□□□ -2.22
FOXC2Q99958 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
FOXC2Q99958 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
FOXC2Q99958 ICE2P2-201ENST00000483823 2787 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 Y_RNA.86-201ENST00000363020 111 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 SNORD115-32-201ENST00000364079 82 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 Y_RNA.339-201ENST00000365325 102 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 SNORA18.2-201ENST00000383865 132 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 RNU6-933P-201ENST00000384424 107 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 RNU6-1026P-201ENST00000384465 108 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 MIR487A-201ENST00000385009 80 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
FOXC2Q99958 RNU2-7P-201ENST00000410794 178 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 Y_RNA.619-201ENST00000410951 90 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 AC009161.1-201ENST00000417306 376 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 AC243428.1-201ENST00000421099 264 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 Z82188.1-201ENST00000436709 154 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 SNORD5.1-201ENST00000458800 75 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 MTND5P5-201ENST00000503764 376 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 AC067942.3-201ENST00000512025 362 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 RNA5SP481-201ENST00000516814 122 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 RNA5SP437-201ENST00000517249 129 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 MTND4LP26-201ENST00000518144 282 ntBASIC1.17□□□□□ -2.22
FOXC2Q99958 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms