Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC022306.3-201ENST00000619930 550 ntBASIC0.45□□□□□ -2.34
SCAF11Q99590 SNORD3E-202ENST00000627253 216 ntBASIC0.45□□□□□ -2.34
SCAF11Q99590 U3.8-201ENST00000363675 217 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 Y_RNA.363-201ENST00000365529 113 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 Y_RNA.399-201ENST00000383955 105 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 SNORA80D-201ENST00000384488 135 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 MIR586-201ENST00000385035 97 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 MIR942-201ENST00000401111 86 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.44□□□□□ -2.34
SCAF11Q99590 MTND3P17-201ENST00000416968 344 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 AL354692.1-201ENST00000423044 315 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.44□□□□□ -2.34
SCAF11Q99590 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.44□□□□□ -2.34
SCAF11Q99590 AC009237.7-201ENST00000447357 229 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.44□□□□□ -2.34
SCAF11Q99590 MTCO3P8-201ENST00000453691 755 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 HMGB1P29-201ENST00000505659 499 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 MIR548AB-201ENST00000584917 84 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 AC006566.1-201ENST00000608943 513 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 AL603839.4-201ENST00000624658 1005 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 U6.108-201ENST00000637764 58 ntBASIC0.44□□□□□ -2.34
SCAF11Q99590 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
SCAF11Q99590 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
SCAF11Q99590 RNA5SP361-201ENST00000362686 118 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 RNU4-76P-201ENST00000364509 141 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 RNU6-1240P-201ENST00000365155 104 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 AF228730.1-201ENST00000397972 663 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 AL034345.1-201ENST00000407768 123 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 RNA5SP494-201ENST00000410653 129 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 RPS3AP1-201ENST00000413190 320 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 CDK8P2-201ENST00000415020 547 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.43□□□□□ -2.34
SCAF11Q99590 MTCO3P18-201ENST00000440206 761 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.43□□□□□ -2.34
SCAF11Q99590 RNU6-1037P-201ENST00000459571 107 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 SRRM1P2-201ENST00000464531 1192 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 AC010493.1-201ENST00000513479 292 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.43□□□□□ -2.34
SCAF11Q99590 SNRPGP20-201ENST00000604477 205 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 AC068792.1-201ENST00000621354 417 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 AL513423.1-201ENST00000621695 132 ntBASIC0.43□□□□□ -2.34
SCAF11Q99590 RNU6-227P-201ENST00000362865 103 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 RNU4-28P-201ENST00000364739 141 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 RNU6-505P-201ENST00000384427 107 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 MIR653-201ENST00000385279 96 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 MRPL42P3-201ENST00000401492 326 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.42□□□□□ -2.34
SCAF11Q99590 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.42□□□□□ -2.34
SCAF11Q99590 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
SCAF11Q99590 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.42□□□□□ -2.34
SCAF11Q99590 AL033528.1-201ENST00000453780 140 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 AC022364.2-201ENST00000457963 554 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 RNU7-167P-201ENST00000459160 62 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 AC025647.1-201ENST00000517879 253 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 BNIP3P39-201ENST00000601077 554 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 AL162424.1-201ENST00000602325 221 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 MTND4P5-201ENST00000435821 1374 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 AC134026.1-201ENST00000623249 2239 ntBASIC0.42□□□□□ -2.34
SCAF11Q99590 RNU5B-2P-201ENST00000363036 113 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RNU6-925P-201ENST00000384629 104 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SCAF11Q99590 RNU2-29P-201ENST00000410423 189 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RPS26P5-201ENST00000418544 335 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AC245047.3-201ENST00000429428 127 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.41□□□□□ -2.34
SCAF11Q99590 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.41□□□□□ -2.34
SCAF11Q99590 AC007215.1-201ENST00000464893 276 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.41□□□□□ -2.34
SCAF11Q99590 RPS26P48-201ENST00000491713 339 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AC025465.4-201ENST00000513422 638 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AC105417.1-201ENST00000514691 285 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RNU6-612P-201ENST00000516909 102 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.41□□□□□ -2.34
SCAF11Q99590 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
SCAF11Q99590 AC004584.2-201ENST00000570407 410 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 Pinc.1-201ENST00000616452 154 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 snoZ196.1-201ENST00000625269 89 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
SCAF11Q99590 RNU4-12P-201ENST00000365233 139 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RNU6-969P-201ENST00000383900 105 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 Y_RNA.488-201ENST00000384403 102 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RNU6-456P-201ENST00000384493 107 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 MIR605-201ENST00000385078 83 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 SNORA40.3-201ENST00000390964 122 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AL355796.1-201ENST00000406706 323 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RNU6-1186P-201ENST00000410429 97 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AC004866.1-201ENST00000411748 78 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RPS26P42-201ENST00000413485 326 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AC008134.1-201ENST00000420943 193 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.41□□□□□ -2.34
SCAF11Q99590 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.41□□□□□ -2.34
SCAF11Q99590 AC005002.2-201ENST00000438228 269 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RPL39P5-202ENST00000512505 151 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 RNA5SP255-201ENST00000516370 107 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 MTND2P32-201ENST00000521584 1038 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AC090049.2-201ENST00000550377 109 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 U2.17-201ENST00000611454 95 ntBASIC0.41□□□□□ -2.34
SCAF11Q99590 AP001506.1-201ENST00000615444 211 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms