Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 RPL23AP75-201ENST00000491601 451 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 TRBVA-201ENST00000498804 316 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 MTND1P5-201ENST00000517906 940 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AC011604.1-201ENST00000545978 196 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AC090049.2-201ENST00000550377 109 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AL157687.1-201ENST00000554853 619 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AL137100.2-201ENST00000555786 315 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 CPDP1-201ENST00000579660 283 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AC004223.2-201ENST00000590309 544 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AC087683.1-201ENST00000591187 441 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.62□□□□□ -2.31
VAT1Q99536 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.62□□□□□ -2.31
VAT1Q99536 AC068790.6-201ENST00000602558 258 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 SNORD11B-201ENST00000607707 90 ntBASIC0.62□□□□□ -2.31
VAT1Q99536 AP000568.1-201ENST00000282964 442 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 Y_RNA.4-201ENST00000362333 112 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 RNU6-784P-201ENST00000384330 106 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 RNU6-1158P-201ENST00000391167 107 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 MIR942-201ENST00000401111 86 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 MIR1185-2-201ENST00000408687 86 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 RNU6-325P-201ENST00000411132 105 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.61□□□□□ -2.31
VAT1Q99536 AL445567.1-201ENST00000439121 144 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 MTND1P27-201ENST00000451117 902 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.61□□□□□ -2.31
VAT1Q99536 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.61□□□□□ -2.31
VAT1Q99536 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.61□□□□□ -2.31
VAT1Q99536 RNU6-917P-201ENST00000516294 104 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 RNU6-1038P-201ENST00000516516 104 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 MTCO2P4-201ENST00000517968 247 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.61□□□□□ -2.31
VAT1Q99536 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.61□□□□□ -2.31
VAT1Q99536 Z94722.1-201ENST00000604328 474 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 MIR8076-201ENST00000611401 83 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.61□□□□□ -2.31
VAT1Q99536 RNA5SP361-201ENST00000362686 118 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 RNU6-82P-201ENST00000363970 107 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 Y_RNA.191-201ENST00000363972 113 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.6□□□□□ -2.31
VAT1Q99536 RNU6-17P-201ENST00000384245 107 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 RNU6-18P-201ENST00000384527 107 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 MIR521-1-201ENST00000384902 87 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
VAT1Q99536 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.6□□□□□ -2.31
VAT1Q99536 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.6□□□□□ -2.31
VAT1Q99536 STAG3L5P-204ENST00000443759 179 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 AC092436.3-201ENST00000511788 257 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 DEFB108E-201ENST00000524692 240 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 AK6P2-201ENST00000549020 471 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 MIR5692C1-201ENST00000585309 91 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 AL357078.3-201ENST00000607528 618 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 AC024933.1-201ENST00000608472 348 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 AL121757.2-201ENST00000611223 313 ntBASIC0.6□□□□□ -2.31
VAT1Q99536 SNORD87-201ENST00000364849 89 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 RNY3P9-201ENST00000384727 106 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AL451046.2-201ENST00000403074 277 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AL663109.1-201ENST00000411498 844 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.59□□□□□ -2.31
VAT1Q99536 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.59□□□□□ -2.31
VAT1Q99536 TPT1P7-201ENST00000458300 517 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.59□□□□□ -2.31
VAT1Q99536 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.59□□□□□ -2.31
VAT1Q99536 RNU6-415P-201ENST00000516252 97 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 RNA5SP255-201ENST00000516370 107 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 RN7SKP287-201ENST00000516546 266 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 APOOP3-201ENST00000536787 586 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AL118558.2-201ENST00000556294 238 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AC040904.1-201ENST00000590850 223 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AC092747.3-201ENST00000603769 301 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AC093424.1-201ENST00000604999 338 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 AC109347.2-201ENST00000610220 349 ntBASIC0.59□□□□□ -2.31
VAT1Q99536 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
VAT1Q99536 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
VAT1Q99536 SNORA72.3-201ENST00000365074 132 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 SNORA2.2-201ENST00000365473 135 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 Y_RNA.381-201ENST00000365666 102 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 RNU6-245P-201ENST00000384020 107 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 RNU5A-6P-201ENST00000384136 116 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.58□□□□□ -2.32
VAT1Q99536 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.58□□□□□ -2.32
VAT1Q99536 AL445305.1-201ENST00000432577 575 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 AL359672.1-201ENST00000442302 409 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 RNU7-21P-201ENST00000459430 62 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 RNU7-94P-201ENST00000459576 63 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 AC091133.4-201ENST00000511142 308 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 RNA5SP54-201ENST00000516951 92 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.58□□□□□ -2.32
VAT1Q99536 MIR4452-201ENST00000583004 71 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 AC091931.1-201ENST00000623488 728 ntBASIC0.58□□□□□ -2.32
VAT1Q99536 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.57□□□□□ -2.32
VAT1Q99536 U3.8-201ENST00000363675 217 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 SNORA25.9-201ENST00000365087 128 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 Y_RNA.378-201ENST00000365652 113 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VAT1Q99536 AL353193.1-201ENST00000421444 268 ntBASIC0.57□□□□□ -2.32
VAT1Q99536 CALM2P4-201ENST00000430810 426 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms