Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNORD116-9-201ENST00000384000 95 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 RNU6-1042P-201ENST00000384204 107 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 SNORD116-3-201ENST00000384287 95 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 SNORD116-7-201ENST00000384404 95 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 SNORD116-5-201ENST00000384462 95 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
RPRD1AQ96P16 RNU6-780P-201ENST00000391030 104 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 AL590002.1-201ENST00000406554 418 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.12□□□□□ -2.23
RPRD1AQ96P16 AC008134.1-201ENST00000420943 193 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.12□□□□□ -2.23
RPRD1AQ96P16 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.12□□□□□ -2.23
RPRD1AQ96P16 Y_RNA.665-201ENST00000516177 98 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 RN7SKP88-201ENST00000516847 250 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 RNA5SP454-201ENST00000517231 127 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 AL512360.1-201ENST00000555346 234 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.12□□□□□ -2.23
RPRD1AQ96P16 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.12□□□□□ -2.23
RPRD1AQ96P16 MIR3664-201ENST00000579074 99 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 7SK.8-201ENST00000612110 250 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 Z99129.1-201ENST00000612510 255 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 7SK.11-201ENST00000615477 250 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 7SK.13-201ENST00000622040 250 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RPRD1AQ96P16 RNU6-128P-201ENST00000383976 107 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 RNU6-245P-201ENST00000384020 107 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 RNU6-790P-201ENST00000384479 105 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 RNU6-1031P-201ENST00000384773 107 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 MIR32-201ENST00000384965 70 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RPRD1AQ96P16 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.11□□□□□ -2.23
RPRD1AQ96P16 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.11□□□□□ -2.23
RPRD1AQ96P16 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.11□□□□□ -2.23
RPRD1AQ96P16 RNU1-142P-201ENST00000516682 145 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 RNA5SP54-201ENST00000516951 92 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 RNU7-128P-201ENST00000517247 62 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 SUMO2P16-201ENST00000519475 264 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.11□□□□□ -2.23
RPRD1AQ96P16 AK6P2-201ENST00000549020 471 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.11□□□□□ -2.23
RPRD1AQ96P16 AC010525.2-201ENST00000590920 195 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 AL390123.1-201ENST00000603216 237 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 AL359075.3-201ENST00000613288 217 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 MIR8065-201ENST00000620577 100 ntBASIC1.11□□□□□ -2.23
RPRD1AQ96P16 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.11□□□□□ -2.23
RPRD1AQ96P16 RNU6-1252P-201ENST00000363054 104 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 SNORD87-201ENST00000364849 89 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 Y_RNA.615-201ENST00000410769 117 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 AL590632.1-201ENST00000424289 371 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.1□□□□□ -2.23
RPRD1AQ96P16 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
RPRD1AQ96P16 NDUFA5P4-201ENST00000436704 385 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 SEPT14P3-201ENST00000439401 183 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 AL353572.1-201ENST00000442490 417 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 AL732372.2-207ENST00000445840 183 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 SEPT14P2-201ENST00000453405 183 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 MTCO2P30-201ENST00000503662 364 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 AC103851.1-201ENST00000506833 274 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 SEPT14P4-201ENST00000513445 186 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 FO082796.1-201ENST00000523795 183 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.1□□□□□ -2.23
RPRD1AQ96P16 SNORD115-32-201ENST00000364079 82 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 RNU4-9P-201ENST00000364951 139 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 RNU6-95P-201ENST00000384697 107 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 SNORA12.1-201ENST00000390873 148 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.09□□□□□ -2.23
RPRD1AQ96P16 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.09□□□□□ -2.23
RPRD1AQ96P16 AL445305.1-201ENST00000432577 575 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 MTND1P11-201ENST00000456661 876 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 AC019235.1-201ENST00000503847 207 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.09□□□□□ -2.23
RPRD1AQ96P16 Y_RNA.704-201ENST00000516851 102 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 RNU6-58P-201ENST00000517143 103 ntBASIC1.09□□□□□ -2.23
RPRD1AQ96P16 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.09□□□□□ -2.23
RPRD1AQ96P16 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 SNORA25.9-201ENST00000365087 128 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 Y_RNA.319-201ENST00000365138 92 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 Y_RNA.373-201ENST00000365600 103 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 RNU6-950P-201ENST00000384651 107 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 MIR1185-2-201ENST00000408687 86 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 RNA5SP247-201ENST00000411181 105 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.08□□□□□ -2.24
RPRD1AQ96P16 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.08□□□□□ -2.24
RPRD1AQ96P16 PCMTD1P1-201ENST00000455560 355 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 RPS23P4-201ENST00000487908 423 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.08□□□□□ -2.24
RPRD1AQ96P16 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 SNORA25.14-201ENST00000516481 132 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 RNU6-165P-201ENST00000517170 99 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AC027288.2-201ENST00000553028 243 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 ZNF519P2-201ENST00000557032 169 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.08□□□□□ -2.24
RPRD1AQ96P16 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
RPRD1AQ96P16 AC245008.1-201ENST00000608123 476 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms