Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AL357075.2-201ENST00000614906 189 ntBASIC2.53□□□□□ -2
CCDC136Q96JN2 snoZ196.1-201ENST00000625269 89 ntBASIC2.53□□□□□ -2
CCDC136Q96JN2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CCDC136Q96JN2 RNY3P11-201ENST00000364153 102 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 MIR676-201ENST00000390702 67 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 RPL31P63-201ENST00000422565 375 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 AL356320.1-201ENST00000429616 163 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 ELOCP24-201ENST00000456370 334 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 TRBV12-1-201ENST00000479785 344 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 SNRPGP19-201ENST00000603826 189 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 AC126177.8-201ENST00000618339 1015 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.52□□□□□ -2.01
CCDC136Q96JN2 RNU5F-3P-201ENST00000363767 117 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 MIR329-1-201ENST00000385028 80 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 AL117342.1-201ENST00000404861 406 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 RNU6-1156P-201ENST00000410365 100 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 AL135786.1-201ENST00000415892 214 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC136Q96JN2 SNORD19B-201ENST00000459623 84 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 RPL23AP42-201ENST00000471152 471 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC136Q96JN2 AC091144.1-201ENST00000519573 138 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 SUB1P3-201ENST00000564581 315 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 AC133104.2-201ENST00000615272 193 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 AC087588.2-201ENST00000617667 426 ntBASIC2.51□□□□□ -2.01
CCDC136Q96JN2 RNU4-73P-201ENST00000363164 141 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 SNORA33-201ENST00000363664 130 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 Y_RNA.577-201ENST00000384794 101 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 MIR559-201ENST00000385188 96 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 RNA5SP425-201ENST00000410336 112 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 RNA5SP100-201ENST00000410903 110 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 RNA5SP59-201ENST00000410922 110 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 HMGN2P19-201ENST00000425149 265 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC136Q96JN2 AC010409.1-201ENST00000487382 476 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.5□□□□□ -2.01
CCDC136Q96JN2 RNU6-107P-201ENST00000516643 102 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 SUB1P4-201ENST00000566062 339 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 MIR6873-201ENST00000622788 63 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC136Q96JN2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.5□□□□□ -2.01
CCDC136Q96JN2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC136Q96JN2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC136Q96JN2 U3.8-201ENST00000363675 217 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 RNU1-96P-201ENST00000364163 162 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 RNU6-318P-201ENST00000384283 103 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 RN7SKP223-201ENST00000410582 62 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 RNU7-169P-201ENST00000459456 61 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 RNU6-221P-201ENST00000459541 99 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 HMGB3P17-201ENST00000504195 649 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 MTND3P22-201ENST00000510932 243 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 MIR4795-201ENST00000584182 89 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC136Q96JN2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC136Q96JN2 MIR338-201ENST00000636369 67 ntBASIC2.49□□□□□ -2.01
CCDC136Q96JN2 MIR625-201ENST00000385047 85 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC136Q96JN2 HMGN2P34-201ENST00000437647 269 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC136Q96JN2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC136Q96JN2 AC025647.1-201ENST00000517879 253 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 MIR1273D-201ENST00000577266 86 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.15-201ENST00000611544 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.16-201ENST00000613119 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.12-201ENST00000613778 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.20-201ENST00000613956 192 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.9-201ENST00000615427 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.11-201ENST00000616345 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.2-201ENST00000616535 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.3-201ENST00000617785 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.19-201ENST00000618602 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 RNU2-1-201ENST00000618664 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.6-201ENST00000619225 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.5-201ENST00000619465 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 U2.10-201ENST00000620268 191 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 AC073544.1-201ENST00000600110 1595 ntBASIC2.48□□□□□ -2.01
CCDC136Q96JN2 snoU2-30.2-201ENST00000362805 70 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 SNORA69.1-201ENST00000390904 137 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 MIR1185-2-201ENST00000408687 86 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 AC114482.1-201ENST00000418010 247 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 MTCO2P27-201ENST00000420740 428 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 UQCRBP2-201ENST00000447827 297 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 RNU6-699P-201ENST00000517081 110 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 RAB11AP2-201ENST00000545905 639 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC136Q96JN2 AC022254.1-201ENST00000567857 235 ntBASIC2.47□□□□□ -2.01
CCDC136Q96JN2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC136Q96JN2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC136Q96JN2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC136Q96JN2 RNU6-1040P-201ENST00000383974 107 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 RNU6-1145P-201ENST00000384246 107 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 RNU6-417P-201ENST00000384712 107 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
CCDC136Q96JN2 Y_RNA.595-201ENST00000410403 105 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms