Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 SNORA40.19-201ENST00000390846 128 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 RNU6-578P-201ENST00000390980 103 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 RPL21P3-201ENST00000395517 478 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.01□□□□□ -1.93
CHFRQ96EP1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.01□□□□□ -1.93
CHFRQ96EP1 AC098614.2-201ENST00000426040 255 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 RPL23AP95-201ENST00000426806 265 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 AC074290.1-201ENST00000448883 135 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.01□□□□□ -1.93
CHFRQ96EP1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.01□□□□□ -1.93
CHFRQ96EP1 AC146507.2-201ENST00000460608 476 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.01□□□□□ -1.93
CHFRQ96EP1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.01□□□□□ -1.93
CHFRQ96EP1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.01□□□□□ -1.93
CHFRQ96EP1 MIR4679-2-201ENST00000578358 77 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHFRQ96EP1 AC024153.1-201ENST00000603103 365 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 MIR6129-201ENST00000616087 109 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 SCARNA4-202ENST00000625402 129 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 AL136360.1-201ENST00000503377 1900 ntBASIC3.01□□□□□ -1.93
CHFRQ96EP1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHFRQ96EP1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3□□□□□ -1.93
CHFRQ96EP1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CHFRQ96EP1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHFRQ96EP1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CHFRQ96EP1 RNU6-942P-201ENST00000363002 107 ntBASIC3□□□□□ -1.93
CHFRQ96EP1 Z98749.2-208ENST00000381646 500 ntBASIC3□□□□□ -1.93
CHFRQ96EP1 RNU6-763P-201ENST00000390865 106 ntBASIC3□□□□□ -1.93
CHFRQ96EP1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3□□□□□ -1.93
CHFRQ96EP1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHFRQ96EP1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3□□□□□ -1.93
CHFRQ96EP1 AC004467.1-201ENST00000615678 330 ntBASIC3□□□□□ -1.93
CHFRQ96EP1 AC090132.2-201ENST00000615881 347 ntBASIC3□□□□□ -1.93
CHFRQ96EP1 AC091932.3-201ENST00000624223 323 ntBASIC3□□□□□ -1.93
CHFRQ96EP1 AC009487.2-201ENST00000420969 6821 ntBASIC3□□□□□ -1.93
CHFRQ96EP1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3□□□□□ -1.93
CHFRQ96EP1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CHFRQ96EP1 AC096644.4-201ENST00000563417 2912 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CHFRQ96EP1 AC010680.1-201ENST00000590024 3590 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 RNU6-873P-201ENST00000363833 107 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 RNU6-755P-201ENST00000364400 103 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 SNORA36A-201ENST00000384221 132 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 MIR325-201ENST00000385260 98 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 RNU6-1064P-201ENST00000410626 104 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 AC007919.1-201ENST00000429380 217 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.99□□□□□ -1.93
CHFRQ96EP1 RPS20P10-201ENST00000451209 253 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 RNU7-107P-201ENST00000459121 61 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 AL121594.1-201ENST00000475906 575 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.99□□□□□ -1.93
CHFRQ96EP1 AIG1P1-201ENST00000503376 148 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 AC107027.2-201ENST00000512197 115 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 RNU6-1282P-201ENST00000516735 96 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 AC018448.1-201ENST00000552843 316 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 MIR5571-201ENST00000577998 113 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 MIR4744-201ENST00000581563 82 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.99□□□□□ -1.93
CHFRQ96EP1 AC069294.1-201ENST00000608397 350 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 TUG1_4.1-201ENST00000619464 181 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.99□□□□□ -1.93
CHFRQ96EP1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.99□□□□□ -1.93
CHFRQ96EP1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHFRQ96EP1 MTND5P32-201ENST00000560711 1802 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHFRQ96EP1 RNY1P11-201ENST00000363759 113 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 RNU4-10P-201ENST00000364383 140 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 SNORA72.2-201ENST00000365028 127 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 RNU1-109P-201ENST00000383960 147 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 RNU6-851P-201ENST00000384565 107 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 MIR518D-201ENST00000385014 87 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 U3.37-201ENST00000408528 213 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 Y_RNA.595-201ENST00000410403 105 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 RNA5SP184-201ENST00000411071 108 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 ELOCP21-201ENST00000412558 336 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AL358075.3-201ENST00000426289 226 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.98□□□□□ -1.93
CHFRQ96EP1 AC087499.2-201ENST00000432861 149 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AL135790.2-201ENST00000437701 267 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AC124916.1-201ENST00000444020 547 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AP000705.1-201ENST00000454567 350 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 RNU6-625P-201ENST00000459412 107 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 RNU7-23P-201ENST00000459465 62 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AC092991.1-201ENST00000477176 376 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.98□□□□□ -1.93
CHFRQ96EP1 RNU6-155P-201ENST00000516347 100 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 Y_RNA.709-201ENST00000516952 92 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AC021269.2-201ENST00000532318 330 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 MIR3124-201ENST00000582636 67 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AC010999.1-201ENST00000611856 324 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHFRQ96EP1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.98□□□□□ -1.93
CHFRQ96EP1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.98□□□□□ -1.93
CHFRQ96EP1 AC008264.2-201ENST00000610193 3731 ntBASIC2.98□□□□□ -1.93
CHFRQ96EP1 AL359693.1-201ENST00000614959 2407 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms