Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC024995.1-201ENST00000523014 93 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 AL121579.1-201ENST00000555129 305 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 MIR3122-201ENST00000577243 73 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 MIR4285-201ENST00000581001 85 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 AL355802.3-201ENST00000607571 545 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.96□□□□□ -2.1
SKA1Q96BD8 AC010999.1-201ENST00000611856 324 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 MIR6845-201ENST00000613182 61 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SKA1Q96BD8 Y_RNA.2-201ENST00000362330 96 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 Y_RNA.48-201ENST00000362710 103 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 RNU6-1266P-201ENST00000362794 105 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 SNORD87-201ENST00000364849 89 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 MIR10B-201ENST00000385011 110 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 MIR548B-201ENST00000385247 97 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 RNU6-700P-201ENST00000391043 107 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SKA1Q96BD8 RNU6-1050P-201ENST00000410388 107 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 RNU2-2P-201ENST00000410396 191 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 Y_RNA.619-201ENST00000410951 90 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 MTND3P23-201ENST00000431980 347 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 AL603825.1-201ENST00000438481 80 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 JTBP1-201ENST00000441314 247 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.95□□□□□ -2.1
SKA1Q96BD8 AC091179.3-201ENST00000474761 144 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 RPL26P26-201ENST00000480251 434 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.95□□□□□ -2.1
SKA1Q96BD8 RNU6-1114P-201ENST00000516022 107 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 Y_RNA.708-201ENST00000516950 96 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 MIR5695-201ENST00000579717 85 ntBASIC1.95□□□□□ -2.1
SKA1Q96BD8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.95□□□□□ -2.1
SKA1Q96BD8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SKA1Q96BD8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SKA1Q96BD8 Y_RNA.415-201ENST00000384012 112 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 RNU6-767P-201ENST00000384132 107 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 Y_RNA.505-201ENST00000384489 102 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 RNU6-601P-201ENST00000384540 107 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 MIR1185-2-201ENST00000408687 86 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 Y_RNA.594-201ENST00000410373 140 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 RPL37P10-201ENST00000412884 288 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.94□□□□□ -2.1
SKA1Q96BD8 AC110588.1-201ENST00000559699 137 ntBASIC1.94□□□□□ -2.1
SKA1Q96BD8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.94□□□□□ -2.1
SKA1Q96BD8 Y_RNA.140-201ENST00000363474 103 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 Y_RNA.287-201ENST00000364853 94 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 RNU6-338P-201ENST00000383888 105 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 Y_RNA.482-201ENST00000384377 111 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 RNU1-139P-201ENST00000391307 165 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 COX6CP10-201ENST00000416832 224 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.93□□□□□ -2.1
SKA1Q96BD8 RNU6-307P-201ENST00000516743 106 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.93□□□□□ -2.1
SKA1Q96BD8 AC090617.3-201ENST00000573670 475 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 PISRT1.1-201ENST00000616930 107 ntBASIC1.93□□□□□ -2.1
SKA1Q96BD8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.93□□□□□ -2.1
SKA1Q96BD8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SKA1Q96BD8 MIR126-201ENST00000362291 85 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.92□□□□□ -2.1
SKA1Q96BD8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SKA1Q96BD8 AC016909.1-201ENST00000415916 166 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 AC073910.1-201ENST00000445047 438 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 snoU13.27-201ENST00000459278 104 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 AC005908.1-201ENST00000468701 347 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 AC103851.1-201ENST00000506833 274 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 Y_RNA.683-201ENST00000516508 93 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 RNU1-142P-201ENST00000516682 145 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.92□□□□□ -2.1
SKA1Q96BD8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.92□□□□□ -2.1
SKA1Q96BD8 MIR4422-201ENST00000581938 83 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 AC005899.2-201ENST00000584353 90 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 AC016727.1-205ENST00000605437 569 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SKA1Q96BD8 CASC19-280ENST00000642102 1351 ntBASIC1.92□□□□□ -2.1
SKA1Q96BD8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SKA1Q96BD8 AC100821.1-201ENST00000523153 2479 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 Y_RNA.106-201ENST00000363189 100 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 MIR190B-201ENST00000401119 79 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 MTCYBP10-201ENST00000424905 650 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 HSPE1P24-201ENST00000450782 238 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 RNU7-30P-201ENST00000516835 62 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 CYCSP23-201ENST00000519781 313 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 MIR5701-3-201ENST00000578890 82 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.91□□□□□ -2.1
SKA1Q96BD8 MIR5701-1-201ENST00000585138 82 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.91□□□□□ -2.1
SKA1Q96BD8 AL359075.3-201ENST00000613288 217 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 MIR5701-2-201ENST00000615634 82 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 MTND5P35-201ENST00000557537 1720 ntBASIC1.91□□□□□ -2.1
SKA1Q96BD8 Y_RNA.67-201ENST00000362870 100 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 RNU1-17P-201ENST00000363022 152 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 Y_RNA.184-201ENST00000363884 108 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 Y_RNA.338-201ENST00000365320 114 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 RNA5SP467-201ENST00000391274 118 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 UBE2V1P7-201ENST00000446395 340 ntBASIC1.9□□□□□ -2.11
SKA1Q96BD8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.9□□□□□ -2.11
SKA1Q96BD8 AC082651.2-201ENST00000496833 166 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms