Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
PHF3Q92576 ZNF299P-201ENST00000406845 1804 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 Y_RNA.796-201ENST00000364268 102 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 Y_RNA.799-201ENST00000364992 102 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 RNU6-1013P-201ENST00000384180 107 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 AC007098.1-201ENST00000420122 367 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 HMGN1P13-201ENST00000505795 138 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 RNA5SP454-201ENST00000517231 127 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 SNORA31.24-201ENST00000517232 57 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.24□□□□□ -2.21
PHF3Q92576 MIR3942-201ENST00000585264 109 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 AC080078.3-201ENST00000605407 463 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.24□□□□□ -2.21
PHF3Q92576 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
PHF3Q92576 Y_RNA.615-201ENST00000410769 117 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.23□□□□□ -2.21
PHF3Q92576 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.23□□□□□ -2.21
PHF3Q92576 AC067942.3-201ENST00000512025 362 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.23□□□□□ -2.21
PHF3Q92576 RNU6-1314P-201ENST00000517139 104 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AF250324.2-201ENST00000608299 610 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 MIR7111-201ENST00000619751 72 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AC010615.1-201ENST00000594254 1764 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 RNU4-40P-201ENST00000364351 143 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 RNU6-1305P-201ENST00000364353 104 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 RNU6-417P-201ENST00000384712 107 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 MIR153-2-201ENST00000385225 87 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 MIR1253-201ENST00000408273 105 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 RNU6-57P-201ENST00000411348 103 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.23□□□□□ -2.21
PHF3Q92576 RNU7-57P-201ENST00000459540 60 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 RNU7-94P-201ENST00000459576 63 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 FO393415.2-201ENST00000480085 343 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AC023790.1-201ENST00000482174 347 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 RNU6-948P-201ENST00000516374 107 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AL590705.4-201ENST00000532209 134 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.23□□□□□ -2.21
PHF3Q92576 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.23□□□□□ -2.21
PHF3Q92576 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AC073869.6-201ENST00000640656 341 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AC027514.1-201ENST00000588561 1603 ntBASIC1.23□□□□□ -2.21
PHF3Q92576 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PHF3Q92576 MIR96-201ENST00000362288 78 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 RNU6-727P-201ENST00000363592 107 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 RNU4-42P-201ENST00000364738 142 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 SNORD116-11-201ENST00000383882 92 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 SNORD26-201ENST00000384147 75 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PHF3Q92576 COX6CP10-201ENST00000416832 224 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 USP9YP16-201ENST00000430287 407 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 AC004386.2-201ENST00000441858 148 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 AC016717.1-201ENST00000448918 286 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.22□□□□□ -2.21
PHF3Q92576 USP9YP23-201ENST00000455085 407 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 MTCYBP18-201ENST00000501056 747 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 SNORA25.14-201ENST00000516481 132 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.22□□□□□ -2.21
PHF3Q92576 MIR4452-201ENST00000583004 71 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 AC006001.4-201ENST00000622243 395 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 Y_RNA.179-201ENST00000363844 90 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 RNU6-593P-201ENST00000364716 112 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 SNORD1A-201ENST00000364968 72 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 RPL30P16-201ENST00000419341 429 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 AL590632.1-201ENST00000424289 371 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 JTBP1-201ENST00000441314 247 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 AC009474.2-201ENST00000451383 136 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 RNU6-221P-201ENST00000459541 99 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 AL137100.2-201ENST00000555786 315 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 MIR6128-201ENST00000615528 109 ntBASIC1.22□□□□□ -2.21
PHF3Q92576 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
PHF3Q92576 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.21□□□□□ -2.22
PHF3Q92576 Y_RNA.3-201ENST00000362331 103 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 RNU1-62P-201ENST00000362599 164 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 RNU6-1240P-201ENST00000365155 104 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 RNU6-338P-201ENST00000383888 105 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 MIR194-1-201ENST00000384892 85 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 MIR320A-201ENST00000385302 82 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 AC099677.2-201ENST00000436385 175 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 MTND4P18-201ENST00000447010 465 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 AC005908.1-201ENST00000468701 347 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 HMGN1P7-201ENST00000491722 313 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.21□□□□□ -2.22
PHF3Q92576 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.21□□□□□ -2.22
PHF3Q92576 AC024995.1-201ENST00000523014 93 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 AL133216.2-202ENST00000634512 349 ntBASIC1.21□□□□□ -2.22
PHF3Q92576 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
PHF3Q92576 MIR424-201ENST00000362227 98 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 Y_RNA.319-201ENST00000365138 92 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 RNU6-95P-201ENST00000384697 107 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 Y_RNA.573-201ENST00000384763 105 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.2□□□□□ -2.22
PHF3Q92576 MTND4LP16-201ENST00000440828 295 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.2□□□□□ -2.22
PHF3Q92576 RPL26P26-201ENST00000480251 434 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 Y_RNA.706-201ENST00000516933 99 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 SNORA59B-202ENST00000578183 701 ntBASIC1.2□□□□□ -2.22
PHF3Q92576 MZT1P2-201ENST00000604387 248 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms