Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 AF228730.1-201ENST00000397972 663 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 AC005002.2-201ENST00000438228 269 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 NDUFB4P10-201ENST00000452541 359 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 RNU7-63P-201ENST00000459054 62 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 HMGB1P29-201ENST00000505659 499 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 MTCO2P4-201ENST00000517968 247 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 CYP3A137P-201ENST00000562436 69 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 MIR5000-201ENST00000577717 103 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 CPDP1-201ENST00000579660 283 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 AC022432.1-201ENST00000595739 310 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 U6.73-201ENST00000619194 103 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 MIR6515-201ENST00000619843 57 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 AC068792.1-201ENST00000621354 417 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 OR5AK4P-201ENST00000635912 903 ntBASIC0.65□□□□□ -2.31
CLHC1Q8NHS4 SNORD115-8-201ENST00000363856 82 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 Y_RNA.201-201ENST00000364052 96 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 RNY1-201ENST00000364228 113 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 RNU4-76P-201ENST00000364509 141 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 SNORD115-38-201ENST00000365037 82 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 RNU6-245P-201ENST00000384020 107 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 SNORA80D-201ENST00000384488 135 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 MIR489-201ENST00000384923 84 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 MIR613-201ENST00000385248 95 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 SNORA26.8-201ENST00000391306 124 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 RPS26P48-201ENST00000491713 339 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 RNU6-189P-201ENST00000516120 101 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 RNU7-99P-201ENST00000516271 62 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 MTND1P5-201ENST00000517906 940 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 AC090049.2-201ENST00000550377 109 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 Z94722.1-201ENST00000604328 474 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 AC024933.1-201ENST00000608472 348 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 FER-210ENST00000628534 558 ntTSL 5 BASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 AC068700.1-201ENST00000565862 3754 ntBASIC0.64□□□□□ -2.31
CLHC1Q8NHS4 RNU6-969P-201ENST00000383900 105 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 MIR942-201ENST00000401111 86 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 MTCO3P18-201ENST00000440206 761 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 RNU7-94P-201ENST00000459576 63 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 MIR8076-201ENST00000611401 83 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 AC022709.1-201ENST00000615967 87 ntBASIC0.63□□□□□ -2.31
CLHC1Q8NHS4 RNA5SP361-201ENST00000362686 118 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 RNU5A-6P-201ENST00000384136 116 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 RNU6-1103P-201ENST00000384150 107 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 MIR450B-201ENST00000401182 78 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 MIR1185-2-201ENST00000408687 86 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 AL358934.1-201ENST00000432346 324 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 RNA5SP54-201ENST00000516951 92 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 SNORD11B-201ENST00000607707 90 ntBASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
CLHC1Q8NHS4 ZNF204P-201ENST00000416749 2397 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 RNU6-199P-201ENST00000362954 107 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 MIR598-201ENST00000384868 97 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AL606923.1-201ENST00000406616 190 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AL445567.1-201ENST00000439121 144 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AL359672.1-201ENST00000442302 409 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 TPTE2P5-203ENST00000458118 728 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 RPL23AP75-201ENST00000491601 451 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 MTND1P35-201ENST00000526739 508 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AL157687.1-201ENST00000554853 619 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AC080078.2-201ENST00000603766 501 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AC104465.1-201ENST00000611365 139 ntBASIC0.61□□□□□ -2.31
CLHC1Q8NHS4 AC023934.1-201ENST00000574529 2389 ntBASIC0.6□□□□□ -2.31
CLHC1Q8NHS4 U3.8-201ENST00000363675 217 ntBASIC0.6□□□□□ -2.31
CLHC1Q8NHS4 SNORA72.3-201ENST00000365074 132 ntBASIC0.6□□□□□ -2.31
CLHC1Q8NHS4 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
CLHC1Q8NHS4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CLHC1Q8NHS4 RNU6-1158P-201ENST00000391167 107 ntBASIC0.6□□□□□ -2.31
CLHC1Q8NHS4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms