Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MIR891A-201ENST00000401237 79 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 MIR892B-201ENST00000401279 77 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 AC005042.3-201ENST00000453230 174 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 AC107401.1-201ENST00000503426 685 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-977P-201ENST00000516411 103 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 AC013828.2-201ENST00000532487 235 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 MTND3P13-201ENST00000574391 343 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 MIR3118-1-201ENST00000581787 76 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 AC025449.1-201ENST00000603896 529 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 AL078596.1-201ENST00000624856 447 ntBASIC-0.55□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-433P-201ENST00000363216 104 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 SNORD56.2-201ENST00000363242 71 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-224P-201ENST00000384055 107 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 MIR643-201ENST00000385267 97 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-269P-201ENST00000391077 97 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 RNA5SP95-201ENST00000410319 137 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 MTND1P4-201ENST00000435196 415 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-848P-201ENST00000515948 107 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-617P-201ENST00000516147 107 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-473P-201ENST00000516164 107 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 MIR4804-201ENST00000581683 73 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 AL355073.2-201ENST00000612106 557 ntBASIC-0.56□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-137P-201ENST00000363680 108 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-580P-201ENST00000365159 107 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 MIR499A-201ENST00000384903 122 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 MIR193B-201ENST00000384907 83 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 RNU2-8P-201ENST00000410727 190 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 AC096531.1-201ENST00000419107 107 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 AL353997.1-201ENST00000432936 108 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 snoU13.6-201ENST00000458785 104 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 RNU7-165P-201ENST00000458864 60 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 RN7SKP287-201ENST00000516546 266 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 AC103996.1-201ENST00000555468 102 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 AC024060.1-201ENST00000607052 494 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 uc_338.6-201ENST00000613544 171 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 AC068880.4-201ENST00000623082 495 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 ZNF204P-201ENST00000416749 2397 ntBASIC-0.57□□□□□ -2.5
SPTSSBQ8NFR3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 SNORA36.1-201ENST00000363424 132 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 SNORA1.1-201ENST00000364671 133 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 SNORA2A-201ENST00000383885 135 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 MIR1185-2-201ENST00000408687 86 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-387P-201ENST00000411331 105 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 PCNPP5-201ENST00000452246 481 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 SNRPGP9-201ENST00000456025 225 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 RNU7-56P-201ENST00000458744 62 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 AC007215.1-201ENST00000464893 276 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 RNU2-56P-201ENST00000516826 190 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 RNA5SP337-201ENST00000517007 109 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 FRG2DP-202ENST00000566967 323 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 MIR4307-201ENST00000582802 84 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 AC005776.1-201ENST00000603164 290 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 AC012467.1-201ENST00000607740 256 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 AC068792.1-201ENST00000621354 417 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 AC027279.3-201ENST00000625055 122 ntBASIC-0.58□□□□□ -2.5
SPTSSBQ8NFR3 SNORA1B-201ENST00000362535 133 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 MIR598-201ENST00000384868 97 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 MIR562-201ENST00000384894 95 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 MIR452-201ENST00000385020 85 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 AL049545.1-201ENST00000401856 572 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 MTND3P20-201ENST00000407663 186 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 AC007327.1-201ENST00000447461 264 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 RNU7-159P-201ENST00000459284 62 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 AC114811.1-201ENST00000507207 168 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 RNU7-43P-201ENST00000516554 64 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 RNU6-344P-201ENST00000516635 111 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 RNA5SP454-201ENST00000517231 127 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 AC093027.1-201ENST00000546698 429 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 AL158211.1-201ENST00000566763 763 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 AP000907.4-201ENST00000604143 237 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 MIR98-201ENST00000606724 119 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 MIR8087-201ENST00000612745 78 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 AC006386.1-201ENST00000619436 415 ntBASIC-0.59□□□□□ -2.5
SPTSSBQ8NFR3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.6□□□□□ -2.5
SPTSSBQ8NFR3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
SPTSSBQ8NFR3 RNU6-39P-201ENST00000384344 107 ntBASIC-0.6□□□□□ -2.51
SPTSSBQ8NFR3 ZNF885P-201ENST00000420174 1098 ntBASIC-0.6□□□□□ -2.51
SPTSSBQ8NFR3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.6□□□□□ -2.51
SPTSSBQ8NFR3 AC005534.2-201ENST00000431047 433 ntBASIC-0.6□□□□□ -2.51
SPTSSBQ8NFR3 snoU13.21-201ENST00000459368 105 ntBASIC-0.6□□□□□ -2.51
SPTSSBQ8NFR3 RPL17P19-201ENST00000489069 552 ntBASIC-0.6□□□□□ -2.51
SPTSSBQ8NFR3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.6□□□□□ -2.51
SPTSSBQ8NFR3 AC010493.1-201ENST00000513479 292 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms