Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 RN7SKP32-201ENST00000410167 303 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 RNU2-2P-201ENST00000410396 191 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 RN7SKP200-201ENST00000410564 320 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 MTCYBP10-201ENST00000424905 650 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 RPS27P1-201ENST00000450552 247 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC107399.1-201ENST00000451226 265 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 RNU7-34P-201ENST00000459394 64 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC026782.1-201ENST00000512952 449 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC046134.1-201ENST00000514454 666 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 Y_RNA.682-201ENST00000516457 100 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 RNU6-358P-201ENST00000516564 75 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 RNU6-307P-201ENST00000516743 106 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AP000889.1-201ENST00000530968 660 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 CBX3P8-201ENST00000532412 525 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 MIR5695-201ENST00000579717 85 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AC005899.2-201ENST00000584353 90 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 AL162424.1-201ENST00000602325 221 ntBASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
LINC01561Q8N1V8 RNU6-1059P-201ENST00000363752 98 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 SNORD48-201ENST00000364953 64 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 RNA5SP363-201ENST00000365072 115 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 SNORA4.2-201ENST00000365313 147 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 Y_RNA.364-201ENST00000365532 101 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 MIR190B-201ENST00000401119 79 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 MRPL35P1-201ENST00000404272 572 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 PGBD4P5-201ENST00000445958 426 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 RPL30P7-201ENST00000479312 323 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 AC103851.1-201ENST00000506833 274 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 Y_RNA.708-201ENST00000516950 96 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 AC105029.1-201ENST00000520250 669 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 AC091544.4-201ENST00000555268 342 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 AC005668.1-201ENST00000571142 476 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 MIR3937-201ENST00000580135 106 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 MZT1P2-201ENST00000604387 248 ntBASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.2□□□□□ -2.22
LINC01561Q8N1V8 AP000648.3-201ENST00000623539 4507 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 RNU6-1264P-201ENST00000383891 107 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 Y_RNA.482-201ENST00000384377 111 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 RNU6-1031P-201ENST00000384773 107 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 MIR513A1-201ENST00000385138 129 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 RN7SKP51-201ENST00000410781 304 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 SNX2P2-201ENST00000424553 323 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 RPS27P16-201ENST00000425758 201 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 EIF1P2-201ENST00000428233 350 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 AC116353.2-201ENST00000505332 712 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 AC010598.1-201ENST00000510378 103 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 AC074133.1-201ENST00000515696 183 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 RNU7-128P-201ENST00000517247 62 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 AC093023.1-201ENST00000547375 507 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 AL442163.3-201ENST00000554110 156 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 AC040896.1-201ENST00000613819 479 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 MTND5P10-201ENST00000603719 1809 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 AL161722.3-201ENST00000605789 2983 ntBASIC1.19□□□□□ -2.22
LINC01561Q8N1V8 Y_RNA.106-201ENST00000363189 100 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 Y_RNA.339-201ENST00000365325 102 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 MIR562-201ENST00000384894 95 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 RNA5SP109-201ENST00000391010 116 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 RNU6-192P-201ENST00000391253 100 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 MRPL42P3-201ENST00000401492 326 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 SNORA11.1-201ENST00000408133 129 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 Y_RNA.594-201ENST00000410373 140 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 RNU6-1050P-201ENST00000410388 107 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 Y_RNA.595-201ENST00000410403 105 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 RNU2-20P-201ENST00000410425 191 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 RN7SKP223-201ENST00000410582 62 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 RPS3AP52-201ENST00000435639 297 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 MRPS10P1-201ENST00000448483 130 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 TRBV12-1-201ENST00000479785 344 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 AC011712.1-201ENST00000588959 234 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 AC068790.6-201ENST00000602558 258 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 AC022217.4-201ENST00000604389 163 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 AC005014.2-201ENST00000607795 599 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 MTND5P16-201ENST00000460269 1703 ntBASIC1.18□□□□□ -2.22
LINC01561Q8N1V8 MIR410-201ENST00000362222 80 ntBASIC1.17□□□□□ -2.22
LINC01561Q8N1V8 RNU6-601P-201ENST00000384540 107 ntBASIC1.17□□□□□ -2.22
LINC01561Q8N1V8 RNU6-331P-201ENST00000384724 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms