Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AL139095.1-201ENST00000404326 391 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 SNORA11.1-201ENST00000408133 129 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 MIR1298-201ENST00000408783 112 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 RNU2-20P-201ENST00000410425 191 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.66□□□□□ -1.98
KRT78Q8N1N4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.66□□□□□ -1.98
KRT78Q8N1N4 AL137159.1-201ENST00000452808 512 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 AC114982.1-201ENST00000469402 321 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.683-201ENST00000516508 93 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 RNU6-344P-201ENST00000516635 111 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 SCARNA24.2-201ENST00000516968 130 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.66□□□□□ -1.98
KRT78Q8N1N4 MIR4643-201ENST00000577473 78 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 AL161756.2-201ENST00000604597 246 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.66□□□□□ -1.98
KRT78Q8N1N4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
KRT78Q8N1N4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
KRT78Q8N1N4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.65□□□□□ -1.98
KRT78Q8N1N4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.65□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.27-201ENST00000362540 103 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.143-201ENST00000363520 106 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 RNU6-281P-201ENST00000384212 103 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 SNORA9-201ENST00000384215 133 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.464-201ENST00000384282 110 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.793-201ENST00000411222 111 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 RNU6-1001P-201ENST00000411265 100 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 SRIP3-201ENST00000413200 219 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.65□□□□□ -1.99
KRT78Q8N1N4 AC087499.2-201ENST00000432861 149 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.644-201ENST00000459006 113 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 U8.22-201ENST00000459141 133 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 AC093259.1-201ENST00000509755 300 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 ATP5EP1-201ENST00000510257 156 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 AC107393.1-201ENST00000512403 346 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.674-201ENST00000516362 113 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 AC074050.1-201ENST00000563247 211 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.65□□□□□ -1.99
KRT78Q8N1N4 MIR4300-201ENST00000581016 96 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.65□□□□□ -1.99
KRT78Q8N1N4 RPL12P50-201ENST00000603116 116 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 BX284668.6-201ENST00000606899 438 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 MIR376A1-201ENST00000616574 68 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.65□□□□□ -1.99
KRT78Q8N1N4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRT78Q8N1N4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KRT78Q8N1N4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.83-201ENST00000363005 113 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.291-201ENST00000364886 113 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.439-201ENST00000384119 94 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 RNU1-148P-201ENST00000384472 162 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.506-201ENST00000384494 102 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.541-201ENST00000384640 113 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 MIR128-1-201ENST00000384921 82 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 SNORA48.2-201ENST00000390926 124 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 EDDM3CP-201ENST00000415977 425 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 AC010095.1-201ENST00000443543 144 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 SNORA74D-201ENST00000516404 141 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.703-201ENST00000516846 111 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 U6.92-201ENST00000636464 89 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 MTND5P35-201ENST00000557537 1720 ntBASIC2.64□□□□□ -1.99
KRT78Q8N1N4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
KRT78Q8N1N4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.64□□□□□ -1.99
KRT78Q8N1N4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.64□□□□□ -1.99
KRT78Q8N1N4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 SNORD115-3-201ENST00000363100 82 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AL138827.1-201ENST00000402666 306 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 MRPL35P1-201ENST00000404272 572 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 MIR1283-1-201ENST00000408494 87 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 Y_RNA.602-201ENST00000410535 92 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 RNU2-48P-201ENST00000410694 191 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 RNA5SP270-201ENST00000411361 118 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AL135938.1-201ENST00000443141 297 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 IFNA11P-201ENST00000446352 526 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AC091179.3-201ENST00000474761 144 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 SERF1AP1-201ENST00000514575 187 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 RNA5SP367-201ENST00000516557 118 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 RNU6-107P-201ENST00000516643 102 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 CYCSP23-201ENST00000519781 313 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AC087441.2-201ENST00000529141 262 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AL442163.3-201ENST00000554110 156 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AL031274.2-201ENST00000599419 203 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 AC132825.6-201ENST00000638861 357 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 LINC02555-201ENST00000563933 1951 ntBASIC2.63□□□□□ -1.99
KRT78Q8N1N4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
KRT78Q8N1N4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms